Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1409 ATGGAGTCCGCTCTAGTGATCAAGGTGAAATATGGAGATACCCTCAGGCGCTTCAGTGCTTGTGTGGACGAGAATAATCGACTGGATCTTGACATGGCTGGGTTGAGGGCCAAGATATGTTCTATCTTCAGTTTCAGCGCTGACGCAAATTTAATTCTGAGATATATTGATGAAGATGGTGACTTGGTGACCTTAGTTGATGATGATGATTTAAGTGATGTGATGAGGCAGCAATTGAAGTTCTTGAAAATTGATGTACATATGAACAATGACGGTGGTGGTAAATCAAATGCTGGGTCTAGTGGAAGTGCCACCCCCTCAGAATCTTGTCCTGTCACAAGCCCATTTCTGTTTAGAAATTCTATGTTACGTGAACATCTTCCTAAAAAAGCAGCATCTTCAAGTCCTATGGTTGATCATCTTGCTGATTCAATTTTGAAAATGGGTCTAAATTCTTATTTCCAGCCTCGTGATGCATCTGGAAAAAGTTCAAAAACTGGTGTTCCTGAAGAACCTATCACTAAAGCAATAGGTCCACAATCTTCACATGTGGATTCGGCCTCCAATGCCAGTGTCAATAGTGGTAGTGCCACCCCGTTAAGATCTCCAGTTCCAAACCCATCTCTGAGCAGAAATGCTGTCAAGGTTGACATCCCATGTTCTGTGCCTGAGACACTTAGTGAGTTTCTTTCCAATTCATCCTGCTCAAATGCTGCATCTTCAAGTCAGTTGCCTGCAAATCTCACAGATTTAATTTCCCTAGTGCCTGAGCAAGTACGCGAGTTTCTTTCCAATTTATCAAGTTCAAATGCTGCATCTTCAAGTCAGCTACCTGTTAATGTCACTGATTTAATTTCCCTACTGGGACGGTCTGTTCTAAATTCTTATTGCCAGCCTCATGTTGCAACTGGTACATTCTCAAGAAATGGTGTTCCTGAAGAACCTATCACTTCTGAGAGAAGAGGTCAACAGATCCCATCTGCAGATCTGGCTTCCAATGCCAGTCAACCGGTGGAGGCAGAAGTTTCCGGTGTTGATCTCAATATCCCTCCTTGTGATCCCTATTTATCTCAGTTCACATATGTAAATAAGGCTCCACTTCCATCAGAAGTCCCTGATGGTGATGGCAAGAAGGGTAAAAAGCCAACTGTCAATAGCTCTGCTGGTAAGGGTGACTGTAGTCGAACATCCTCAACTTATGCTGGTCCTAATAACAGTTCAACCCAGACTACTAAATTGAGTTCTGGTGCTTTCATTGACTGTCCATTTTCTGGGACATATATTAATTCTTGGGCACCAGTCACACCACCACTAGGAAACTCTCAAATGCCCCCATTTAAAAGGAGCCATAGTCACACTGATGCAATGACTGGTATGTTCCATAAGGGGGTCCGCTGTGATGGCTGTGGTGTCTTTCCAATAACTGGACCTCGTTTCAAATCCAAAGTAAAGGAAAATTATGATCTTTGCAACATTTGTTTCAATGAAATGGGTATTGGGACAGATTATATCAGAATGGACCGCCCTGCGTCTGCTCGTGCCCCTCGACATCCAACATTACCACCACATATTTTTAAGAAAGGTGCCCTTTTGAAGCATGCAAGGCCAAAGCTAGATAGTCGGTTCATCCTGGATGTCAATGTGATAGATGGTACAATGATGGCTCCATCTACTCCATTTACTAAGATCTGGCGGATGCGAAATAATGGCACTTTAGTCTGGCCCAAAGCAACTCAACTTGTTTGGATTGGAGGAGACAAGTTTAGCGACTCTCATTCAGTTGATTTAGAGTTTTGTTTTGCTGGTTATAGAATCTGTGTGCTCTCTGTCTGGTCAAACATCCCCCAGGTTGCCGAGGATGGTGTCGCTGTAGAGAAGGAACTTGATGTTGCAGTTGACTTTACAGCACCTCAGTTACCTGGTCGATACATATCATACTGGAGGATGGCCACTCCATCAGGACATAAATTTGGTCAACGTGTTTGGGTCCTTATACAGGTTGATACCTCTCTCAAGGACTCATTTTATGATAAATCTCAAGGTCTGAACTTGAATATTCCCCTTGATATCAGTGGCTCTAAAGGACCTCAGATTATAGATATCAATGTCCAGCCTACTGAGGATGATATTGTTCTTCAAACCCACAGTCCTAATGCTCCCATTGAACCTCTGAATCAAGTGGTTGATAATGAACCAAGGTTGGAGCTGGAAAACGAATTCCCTATAAATGAAGCTACATTTGTTGCCCCTGTTGCCTCAGCTCCTGCTGCAACCTCTGTGGCATCTTCATCAGTTTCTTATCCTATTATTGATTTATCTGAAACAACCCCAGCTGTTCCCTCTGTGGATGTGCCATCGTCATCATCTATGGTGACTGGTGGAATTAATTCTATGGAGGAGAGTCTACTTAAAGAGCTTGAGGAGATGGGTTTTAAGCAGGTTGATTTGAACAAGGAGATCTTGAGGAAGAATGAGTACGATCTGGAGCAATCCCTAGACGCCCTCTGTGGTGTTGATGTCGGTGGTGTTTCTGAGTGGGACCATATGCTTGGAGAGTTACAGGAAATGGGTTTCCGTGACAAAGAGGTGAATAAGAGGCTGCTTCAGAAAAACAACGGAAGCCTCAAACGCGTTGTTATGGATTTAATCAACGGCGAGTAG 2661 0.4337 MESALVIKVKYGDTLRRFSACVDENNRLDLDMAGLRAKICSIFSFSADANLILRYIDEDGDLVTLVDDDDLSDVMRQQLKFLKIDVHMNNDGGGKSNAGSSGSATPSESCPVTSPFLFRNSMLREHLPKKAASSSPMVDHLADSILKMGLNSYFQPRDASGKSSKTGVPEEPITKAIGPQSSHVDSASNASVNSGSATPLRSPVPNPSLSRNAVKVDIPCSVPETLSEFLSNSSCSNAASSSQLPANLTDLISLVPEQVREFLSNLSSSNAASSSQLPVNVTDLISLLGRSVLNSYCQPHVATGTFSRNGVPEEPITSERRGQQIPSADLASNASQPVEAEVSGVDLNIPPCDPYLSQFTYVNKAPLPSEVPDGDGKKGKKPTVNSSAGKGDCSRTSSTYAGPNNSSTQTTKLSSGAFIDCPFSGTYINSWAPVTPPLGNSQMPPFKRSHSHTDAMTGMFHKGVRCDGCGVFPITGPRFKSKVKENYDLCNICFNEMGIGTDYIRMDRPASARAPRHPTLPPHIFKKGALLKHARPKLDSRFILDVNVIDGTMMAPSTPFTKIWRMRNNGTLVWPKATQLVWIGGDKFSDSHSVDLEFCFAGYRICVLSVWSNIPQVAEDGVAVEKELDVAVDFTAPQLPGRYISYWRMATPSGHKFGQRVWVLIQVDTSLKDSFYDKSQGLNLNIPLDISGSKGPQIIDINVQPTEDDIVLQTHSPNAPIEPLNQVVDNEPRLELENEFPINEATFVAPVASAPAATSVASSSVSYPIIDLSETTPAVPSVDVPSSSSMVTGGINSMEESLLKELEEMGFKQVDLNKEILRKNEYDLEQSLDALCGVDVGGVSEWDHMLGELQEMGFRDKEVNKRLLQKNNGSLKRVVMDLINGE 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1409 886 Pfam PB1 domain 6 77 IPR000270 GO:0005515
Aed6g1409 886 ProSiteProfiles Zinc finger ZZ-type profile. 461 511 IPR000433 GO:0008270
Aed6g1409 886 MobiDBLite consensus disorder prediction 320 337 - -
Aed6g1409 886 SUPERFAMILY RING/U-box 455 511 - -
Aed6g1409 886 SUPERFAMILY UBA-like 846 884 IPR009060 GO:0005515
Aed6g1409 886 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 1 162 - -
Aed6g1409 886 MobiDBLite consensus disorder prediction 367 411 - -
Aed6g1409 886 Gene3D - 843 885 - -
Aed6g1409 886 Gene3D Immunoglobulins 533 671 IPR013783 -
Aed6g1409 886 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 311 886 - -
Aed6g1409 886 SMART PB1_new 4 89 IPR000270 GO:0005515
Aed6g1409 886 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 797 835 IPR015940 -
Aed6g1409 886 Pfam Zinc finger, ZZ type 461 496 IPR000433 GO:0008270
Aed6g1409 886 MobiDBLite consensus disorder prediction 387 411 - -
Aed6g1409 886 MobiDBLite consensus disorder prediction 179 209 - -
Aed6g1409 886 ProSiteProfiles PB1 domain profile. 4 86 IPR000270 GO:0005515
Aed6g1409 886 Gene3D - 1 88 - -
Aed6g1409 886 MobiDBLite consensus disorder prediction 156 209 - -
Aed6g1409 886 CDD UBA_NBR1 845 883 - -
Aed6g1409 886 Gene3D - 453 520 IPR043145 -
Aed6g1409 886 Pfam Ig-like domain from next to BRCA1 gene 547 667 IPR032350 -
Aed6g1409 886 MobiDBLite consensus disorder prediction 306 337 - -
Aed6g1409 886 PANTHER PROTEIN JOKA2 1 162 - -
Aed6g1409 886 SMART zz_5 460 505 IPR000433 GO:0008270
Aed6g1409 886 Gene3D - 792 840 - -
Aed6g1409 886 SUPERFAMILY CAD & PB1 domains 4 79 - -
Aed6g1409 886 PANTHER PROTEIN JOKA2 311 886 - -
Aed6g1409 886 CDD NBR1_like 536 668 IPR032350 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1409 K17987 - gmx:100778692 1342.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1409 6 18557028 18561583 Aed6g1409 6 18557028 18561583 ECH