Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1398 ATGGCTGTTCGCACTGTCACCACCACTCCTTCTCTTTTGCCAACCTCACCCACCCCAAAACGCTTCATCCTTCAACCCTTTAAAAGCCGCGTTTCGTTACTTAAATCTTTCAAATGCCTCCAACCCGCTTCGGCTTGGTTCAAGCCGAGCCCTTTTATTTCCTGCTCCGCGCTCACTACCTCGGAGCTGGTCGTGCCTTCCAAGCTCGAGCACCTCGCGGAGGAGTTCGGCTCTCTCCGGGAGCCGGTGGAGCGCGTCAAACGCCTGCTGCGCTACGCGGCGGCCATGGACCCGTTTCCGGACTCGGGCCGGGTCGACACGAACCGTGTGATGGGGTGCACCGCGCGCGTGTGGGTCGAAGTGGGGATCGACGAAAAGGGGAAGGTGCGCGTGGCGGCGGACAGCGATTCGGAGATTACGAGGGGGTTCTGCGCGTGTCTGGTTTGGCTGCTCGACGGTTCGGAGCCGGACGAGGTCATGGAAGTGACCACCGTTGATTTGGTGGGTTTGAATGTGGGCTTGCCCGGTGGGAGTGGCCGTTCCAGGGTGAACACGTGGCACAACGTGCTCGTCAGCATGCAGAAGAGGACCAAGCAGTTACTTGCTCTGAGGGAAGGGAAGCTTCCCTTTGAGCCTTTTCCTTCGTTGCTTATTTCCTCTGATGGGGTTTTTCCCAAAGGTAGCTACGCTGAAGCACAGGCAAAATATCTACTCCCTAATGAGTTAAAAGTTAATGAACTAGTCAATGTGCTGAAGGAAAAGAAAATTGGTGTTGTTGCACACTTTTACATGGATCCTGAGGTCCAAGGCATTTTAACTGCTGCTCAGAAGCAGTGGCCACATATCCATATATCTGATTCACTGGTCATGGCAGATTCAGCTGTCAAAATGGCAAAAGCCGGATGCCAATTCGTAACAGTTCTAGGTGTGGATTTTATGTCAGAAAATGTGCGTGCCATCCTTGATCAAGCTGGTTTTAGTGAGGTTGGTGTGTATAGGATGTCAAATGAGCAAATTGGCTGTTCTCTGGCTGATGCTGCAGCTACTCCTACTTACATGGAATATCTTACGGCTGCTTCTAGGTCTACTTCTTTGCATGTCATATACATTAACACTAAGTTAGAGACAAAGGCATACACTCATGAGCTTGTGCCAACAATAACCTGCACTTCATCAAATGTTGTCCAGACTATCCTACAGGCATTTGCTCAAGTTCCAGATTTGAGCATATGGTATGGACCTGATTCTTACATGGGTGCAAATATTAAAGACTTGCTCCAACAAATGACCAAAATGACTGATGAAGAGATTGCTGCAATACATCCTGAGCACAGTCAAGACTCGATTAGATCATTACTACCTCGACTTCACTATTTTCAGGATGGAACATGCATTGTTCACCATCTATTTGGCCATGAAGTTGTGGAGAAGATAAAAGAAATGTACTGTGATGCATTCCTTACTGCCCATCTTGAAGTACCCGGAGAGATGTTTTCATTGGCAATGGAAGCAAGGAGAAGGGGAATGGGTGTAGTAGGCTCCACGCAGAATATTTTAGATTTCATAAAGGATAGGGTTCAGGAAGCTTTGGATAGAAATATAGATGATCATCTCCAATTTGTTTTGGGAACAGAATCAGGGATGGTGACTTCAATTGTGGCAACAGTTCGCAATTTGTTGGAGCCTGCAAAGTCCTCTTCTCAGAGAGCAAAAGTGACCGTTGAAATAGTCTTTCCAGTTTCATCAGATTCAATCTCAACAACAACCTCAAGTTCATCCTCGGGTCTTTATTCAGCCAAAGTGGGTGATATCATACTTCCTGTTGTACCAGGAATAGCTAACGGGGAGGGTTGTTCAATTCATGGTGGCTGTGCATCTTGTCCATACATGAAGATGAATTCTCTTAGCTCACTCCTGAAAGTCAGCCACCACCTACCGGATGAAGAAAATAATATCCTTTCAGCATACAAGGCAGAGCGATTTAAGTTGCAAACACCAAATGGCAAATCAGTGGCAGATGTTGGATGTGAACCTATTTTGCACATGAGGAACTTCCAGACTACTAAAAAGCTACCAGAGAAGCTCGTTGATCAGATTCTTCATACACAAGACAATAGAAGGTCGATGTGA 2130 0.4714 MAVRTVTTTPSLLPTSPTPKRFILQPFKSRVSLLKSFKCLQPASAWFKPSPFISCSALTTSELVVPSKLEHLAEEFGSLREPVERVKRLLRYAAAMDPFPDSGRVDTNRVMGCTARVWVEVGIDEKGKVRVAADSDSEITRGFCACLVWLLDGSEPDEVMEVTTVDLVGLNVGLPGGSGRSRVNTWHNVLVSMQKRTKQLLALREGKLPFEPFPSLLISSDGVFPKGSYAEAQAKYLLPNELKVNELVNVLKEKKIGVVAHFYMDPEVQGILTAAQKQWPHIHISDSLVMADSAVKMAKAGCQFVTVLGVDFMSENVRAILDQAGFSEVGVYRMSNEQIGCSLADAAATPTYMEYLTAASRSTSLHVIYINTKLETKAYTHELVPTITCTSSNVVQTILQAFAQVPDLSIWYGPDSYMGANIKDLLQQMTKMTDEEIAAIHPEHSQDSIRSLLPRLHYFQDGTCIVHHLFGHEVVEKIKEMYCDAFLTAHLEVPGEMFSLAMEARRRGMGVVGSTQNILDFIKDRVQEALDRNIDDHLQFVLGTESGMVTSIVATVRNLLEPAKSSSQRAKVTVEIVFPVSSDSISTTTSSSSSGLYSAKVGDIILPVVPGIANGEGCSIHGGCASCPYMKMNSLSSLLKVSHHLPDEENNILSAYKAERFKLQTPNGKSVADVGCEPILHMRNFQTTKKLPEKLVDQILHTQDNRRSM 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1398 709 SUPERFAMILY NadA-like 244 646 IPR036094 GO:0008987|GO:0009435|GO:0051539
Aed6g1398 709 Gene3D - 348 436 IPR036094 GO:0008987|GO:0009435|GO:0051539
Aed6g1398 709 Pfam Quinolinate synthetase A protein 248 555 IPR003473 GO:0008987|GO:0009435|GO:0051539
Aed6g1398 709 PANTHER QUINOLINATE SYNTHETASE A 206 699 IPR003473 GO:0008987|GO:0009435|GO:0051539
Aed6g1398 709 Gene3D - 239 347 IPR036094 GO:0008987|GO:0009435|GO:0051539
Aed6g1398 709 Gene3D - 52 200 - -
Aed6g1398 709 Pfam Fe-S metabolism associated domain 74 195 IPR003808 -
Aed6g1398 709 SUPERFAMILY SufE/NifU 61 201 - -
Aed6g1398 709 Gene3D - 464 559 IPR036094 GO:0008987|GO:0009435|GO:0051539
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1398 Aed-Chr6 18506921 18511528 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1398 K03517 - zju:107418310 1018.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1398 6 18506921 18511528 Aed6g1398 6 18506921 18511528 ECH