Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1375 ATGGCTTCGCAAACGAATGGTCGTCCATTGCCAAAATTCGGAGAGTGGGATGTGAACAATCCAGCCTCAGCAGAAGGTTTTACTGTGATATTCAATAAGGCAAGAGATGAGAAGAAGACTAACACTAACACAGCAGCAACACCACGTAGGTCTGACCCTGCGTTCAAGAATCAGAATTATAACGATCCTCAATTATCTGGAAAGAGTAAGTGGTTTTGCTGCGGCTGA 228 0.443 MASQTNGRPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTNTNTAATPRRSDPAFKNQNYNDPQLSGKSKWFCCG 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1375 75 PANTHER RPM1-INTERACTING PROTEIN 4-LIKE 3 74 - -
Aed6g1375 75 MobiDBLite consensus disorder prediction 44 62 - -
Aed6g1375 75 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 74 IPR040387 -
Aed6g1375 75 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 5 40 IPR008700 -
Aed6g1375 75 MobiDBLite consensus disorder prediction 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1375 Aed-Chr6 18349081 18352397 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1375 - - gmx:100811925 143.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1375 6 18349081 18352397 Aed6g1375 6 18349081 18352397 ECH