Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1374 ATGGCTTCTTCTATGTCATCTTCTACAATCCTCCTAATTACAATCATCACACTGTCCTCACTTGTGTCAGTTTCTTCTTCTTCTGCAGCAGCAGCAGCAGATGAAGAACGAACAAGGCCCTTCAAAAGGGTCTACGCCTTCGGAGATTCCTTCACAGACACCGGCAACACCCAAAACGCCGAAGGCCCAAGTGGCTTCGGCCATGTTTCAAACTCACCCTACGGCACCACCTTCTTCAACCACTCCACAAACAGATACTCAGATGGAAGGCTTGTGATTGATTTCGTGGCTGAGTCACTTTCACTGCCTTACTTGCCACCCTATCGCCACAGCAAAGGCAATGACACCTTTGGTGTCAACTTTGCCGTTGCTGGCTCCACTGCCATAAACCATTTGTTCTTTGTCAGAAACAACCTCTCCCTTGACGTCACTCCTCAGTCCATCCAAACCCAAATGATATGGTTCAACAAGTACCTTGAGAGCCAGGAGTGTCGGGAATCTAAGTGCAATGATTTTGATGACACTCTTTTTTGGTTTGGGGAGATTGGTGTCAATGACTATGCCTACACTCTTGGATCTGCTGTCTCTGATGACACCATTAGGAAGCTTGCAATCACCAGTGTCTCAGGAGCCTTACAGGCATTGCTCGAGAAGGGTGCCAAGTACCTAGTTGTGCAGGGTTTGCCTCTAACAGGGTGCTTGACACTGTCCATGTACCTAGCTCCTCCGGATGACAGAGATGACATAGGATGCGTGAAAAGTGTGAACAACCAAAGCTACTACCACAACCTTGTGCTGCAAGACAAATTACAAGAATTCAGAAAACAGTTCCCTCAAGCTGTGATACTCTATGCTGATTACTATGATGCCTACAAAACTGTCATGAAGAGTCCAAGTAAATTCGGATTCAAAGAGACTTTCAACGTTTGCTGTGGATCAGGAGAACCACCTTACAACTTCACTGTGTTTGCAACATGTGGCACACCAAACGCCACTGTGTGCTCAAACCCTTCTCAGTACATCAATTGGGATGGTGTTCACCTCACTGAGGCCATGTACAAAGTCATTTCTAGCATGTTTTTGCAAGGAAATTTCACTCAACCTCCATTTAATTTTTTATTGGGACAAAAAGAGAGGGTGGGGTGA 1146 0.4599 MASSMSSSTILLITIITLSSLVSVSSSSAAAAADEERTRPFKRVYAFGDSFTDTGNTQNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVAESLSLPYLPPYRHSKGNDTFGVNFAVAGSTAINHLFFVRNNLSLDVTPQSIQTQMIWFNKYLESQECRESKCNDFDDTLFWFGEIGVNDYAYTLGSAVSDDTIRKLAITSVSGALQALLEKGAKYLVVQGLPLTGCLTLSMYLAPPDDRDDIGCVKSVNNQSYYHNLVLQDKLQEFRKQFPQAVILYADYYDAYKTVMKSPSKFGFKETFNVCCGSGEPPYNFTVFATCGTPNATVCSNPSQYINWDGVHLTEAMYKVISSMFLQGNFTQPPFNFLLGQKERVG 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1374 381 Pfam GDSL-like Lipase/Acylhydrolase 44 358 IPR001087 GO:0016788
Aed6g1374 381 Gene3D SGNH hydrolase 30 364 IPR036514 -
Aed6g1374 381 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 12 378 - -
Aed6g1374 381 SUPERFAMILY SGNH hydrolase 41 361 - -
Aed6g1374 381 CDD SGNH_plant_lipase_like 44 364 IPR035669 -
Aed6g1374 381 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 12 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1374 Aed-Chr6 18343257 18345119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1374 25 363 Acyl Lipid Metabolism Gene Families AT4G10950 26.554 1.86e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1374 - - gmx:100810163 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1374 6 18343257 18345119 Aed6g1374 6 18343257 18345119 ECH