Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1373 ATGCCATTTTTCTCTGTTTTGCCACCCTATTTATTCTCTCTTTTCACCCTTGGGATCACATCACAATCCCATGTTTCAGCAATGTTACGTTACCAAATGCTTGATTCAGCACCCTCTTTCCTAGACTCCCTCAAGGCACTTGAGGCTGACATCCAACATGCCAATGTTCTGGCAACTTCAATTCCAAGGGGCAAGGACAGGGCTTACCTTCAAATGAAGCTAGTTTACAATAAACTGGCACCAGTTTTTCTGTTTTTATTTCAATGGATGGATTACTCATGCTCCTGTCTACCTCTACCTTCTACTCATTTGAATCTTTTCCGCGTAGTTGTGTACAAGGTGCACACCAATGGAAAGTCAGATATCTATTCTAGTGGAAGGAAAGCAACCATAAGGGAGTTCTACAGTGTTATATTACCTTCACTTAAGCGCCTTCATGGTGATTTAGTAGAAACTGACACCACTCAAGAAAATGATCACAGCATGAGTGAAGAGGATAAGAAGAAGCCTTCTGATTTGGACTTTGAAAGAGAACATGAGTGTGGCATTTGCTTAGAGTCTTGCACCAAAATGGTTTTGCCTAATTGCTACCATGCTATGTGTATAAATTGTTACAATGACTGGAACACAAGGTCAGAATCTTGTCCATTTTGCCGTGGAAGTTTGAAGAGAGTGAATTCGGGGGATTTGTGGGTTCTGACATGCAGTAGAGATGTGACTGATATGCAAACTATATACAGAGAAGATTTGTTGCGTCTATATCTCTTTGTAAACAACCTTCCCGAATATACCCCTGATGCTCTTTTCCTTATGTATTACGAGTACTTATTGTAA 834 0.4041 MPFFSVLPPYLFSLFTLGITSQSHVSAMLRYQMLDSAPSFLDSLKALEADIQHANVLATSIPRGKDRAYLQMKLVYNKLAPVFLFLFQWMDYSCSCLPLPSTHLNLFRVVVYKVHTNGKSDIYSSGRKATIREFYSVILPSLKRLHGDLVETDTTQENDHSMSEEDKKKPSDLDFEREHECGICLESCTKMVLPNCYHAMCINCYNDWNTRSESCPFCRGSLKRVNSGDLWVLTCSRDVTDMQTIYREDLLRLYLFVNNLPEYTPDALFLMYYEYLL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1373 277 ProSitePatterns Zinc finger RING-type signature. 196 205 IPR017907 -
Aed6g1373 277 Pfam Zinc finger, C3HC4 type (RING finger) 178 224 - -
Aed6g1373 277 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 228 IPR013083 -
Aed6g1373 277 SUPERFAMILY RING/U-box 167 224 - -
Aed6g1373 277 PANTHER OS01G0905700 PROTEIN 36 277 - -
Aed6g1373 277 PANTHER RING FINGER PROTEIN 41, 151 36 277 - -
Aed6g1373 277 SMART ring_2 181 218 IPR001841 -
Aed6g1373 277 ProSiteProfiles Zinc finger RING-type profile. 181 219 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1373 Aed-Chr6 18339851 18342043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1373 - - fve:101303422 355.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1373 6 18339851 18342043 Aed6g1373 6 18339851 18342043 ECH