Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1361 ATGGATATCGGAACCTATGGCTATCCCACTACACCAGCAGTGAAAAAGATAGACTCACACTATGACGTGCCAGAAGGAGTGGATATTCGGGGAAGATACGATGCAGAGTTTGCAAAAATCCTCACAAGAGATGCTCTGAAATTCGTTGCAGAGCTGCAACGTGAGTTCAGGAACCATATTAAGTACGCGTTGGAATGCCGAAGAGAGGCAAAGAGGAGGTACAATGAAGGGACTCTTCCGGGGTTTGATCCCGCCACGAGGTACATAAGAGAGGAAGAGTGGGTGTGTGCATCTGTTCCACCCGCTGTTGCTGATAGGAAAGTGGAGATCACTGGCCCTGTTGATAGAAAAATGGTCATCAATGCTCTTAACTCTGGAGCTAAAGTCTTTATGGCTGATTTTGAAGATGCACTATCACCAAGTTGGGAAAATCTTATGAGAGGCCAAGTGAACTTGAAGGATGCAGTAGCTGGGACCATAAGCTTGCATGACAAAGTAAGAAACAGGGTTTACAAGCTCAATGATCAGATAGCAAAGCTTTTTGTGCGGCCAAGAGGTTGGCACTTACCCGAGGCACACATTCTGATTGATGGTGAACCTGCAACTGGTTGCCTTGTTGATTTTGGCCTCTACTTCTTCCACAACCACTCTCCATTCCGCCGCACTCAAGGTGCTGGCTTTGGCCCTTTCTTTTACCTTCCCAAAATGGAGCATTCAAGGGAAGCTAAGATATGGAACAGTGTGTTTGAGAAGGCTGAGAAGGTAGCAGGCATTGAGAGAGGAAGCATCAGGGCAACCGTTCTGATAGAAACACTTCCTGCAGTGTTTCAAATGGATGAAATTCTGTATGAGATGAAGGAACACTCTGTGGGTCTGAACTGTGGGCGTTGGGATTACATTTTCAGTTATGTTAAGACCTTCCAGGCTCACCCTGACCGCCTCCTACCAGACAGAGTCCTAGTTGGTATGACTCAGCACTTCATGAAGAGCTACTCCGATCTCCTCATCAGGACGTGCCACCGGCGCGGTGTGCATGCCATGGGAGGAATGGCAGCACAGATTCCAATAAAAGAAGATCCGGTGGCTAACGAGGTAGCACTGGAACTGGTAAGGAAGGACAAGCTTAGAGAAGTGAAGGCAGGGCACGATGGAACATGGGCTGCACACCCTGGTCTCATTCCATCATGCATGGAGATTTTCAACAACAACATGGGAAATGCTCCGAACCAGATAAAGACAGTTAAACGTGAAGATGCTGCAAACACAGCTGAGCAAGACCTCTTGCAGATACCAAGAGGAACCCGCAGCATGGAAGGTCTGAGATTGAACACACGTGTGGGAATTCAGTACGTGGCGGCGTGGCTCACCGGGAGCGGCTCGGTGCCGCTTTACAACCTCATGGAGGACGCCGCCACCGCCGAGATCAGCAGGGTGCAGAACTGGCAGTGGCTCAAGTATGGAGTGGAACTCGATGGGGATGCACTTGGAGTTAAAGTGAACAGAGAACTTTTTGGTAGGGTGGTTGAAGAAGAGATGGCTAGGATTGAAAAGGAAGTGGGGAAAGAGAAGTTCAAGAAGGGAATGTACAAGGAGGCTTGCAAGATCTTCACTCGCCAGTGCACTTCTCCAACGCTTGATGATTTTCTCACTCTCGATGCTTATAATTACATTGTCGTGCATCACCCCAGGGAAACAACGTCAAAGCTTTGA 1710 0.4854 MDIGTYGYPTTPAVKKIDSHYDVPEGVDIRGRYDAEFAKILTRDALKFVAELQREFRNHIKYALECRREAKRRYNEGTLPGFDPATRYIREEEWVCASVPPAVADRKVEITGPVDRKMVINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVAGTISLHDKVRNRVYKLNDQIAKLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFFHNHSPFRRTQGAGFGPFFYLPKMEHSREAKIWNSVFEKAEKVAGIERGSIRATVLIETLPAVFQMDEILYEMKEHSVGLNCGRWDYIFSYVKTFQAHPDRLLPDRVLVGMTQHFMKSYSDLLIRTCHRRGVHAMGGMAAQIPIKEDPVANEVALELVRKDKLREVKAGHDGTWAAHPGLIPSCMEIFNNNMGNAPNQIKTVKREDAANTAEQDLLQIPRGTRSMEGLRLNTRVGIQYVAAWLTGSGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDALGVKVNRELFGRVVEEEMARIEKEVGKEKFKKGMYKEACKIFTRQCTSPTLDDFLTLDAYNYIVVHHPRETTSKL 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1361 569 TIGRFAM malate_syn_A: malate synthase A 40 557 IPR006252 GO:0004474|GO:0006097
Aed6g1361 569 PIRSF Malate_synth 18 559 IPR006252 GO:0004474|GO:0006097
Aed6g1361 569 ProSitePatterns Malate synthase signature. 286 301 IPR019830 GO:0004474|GO:0006097
Aed6g1361 569 CDD malate_synt_A 40 558 IPR006252 GO:0004474|GO:0006097
Aed6g1361 569 Gene3D Malate synthase, domain III 434 558 IPR044856 -
Aed6g1361 569 PANTHER MALATE SYNTHASE 20 563 - -
Aed6g1361 569 Pfam Malate synthase 28 558 IPR001465 GO:0004474|GO:0006097
Aed6g1361 569 Gene3D Malate synthase, domain 3 23 433 IPR046363 -
Aed6g1361 569 SUPERFAMILY Malate synthase G 23 558 IPR011076 GO:0003824
Aed6g1361 569 PANTHER MALATE SYNTHASE 20 563 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1361 Aed-Chr6 18258454 18262632 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1361 K01638 - gmx:732628 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1361 6 18258454 18262632 Aed6g1361 6 18258454 18262632 ECH