Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1347 ATGGCGGATTTGATCCCGGCGCCACCAAGATCCGCCACGGACTTGTTCTCGGATCCGCTCGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCTGACTTCGACTCCGAATCCTACATTTCGGAGCTGCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTCAACAGCTACCTCTCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGATTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGATGCCGTCGTCGTGCGAATGAGGGCCCCGCTCGTCGAGCTCCGCGAGAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTTTCGCTCGTCGCTATAAAGAACCGCTTGAGGCAGAGATCTGAGGTCGCCTCCGCTAGAGAGACTTTGGAGCTTCTTCTCGACGCGTTCCATGTCGTTTCTAAGGTTGAGAAGCTGATAAAAGAGCTGCCTAGTGTACCCACGGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATAACTTGAGCAATGGAGTTTCTGTGCAGCATCTTGAGAATGAGACGAGTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACAGACTAAAGTTCTATGTTACACATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAACCTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCTATAGATAACACCAAGAATGCAGAGGAAATTTTTCGAATTACTGTTGTGGCTCCATCGGTACTGAAGATTATCCCGCATGGGCCATCAGCTGTGGTTGCTGGATCATCTGGGGATGGTCTTGAAAATGATTATCAACGAATTAAGGAGTGCATTGATAAAGACTGTAAATTTTTAGTGGAAATATCTTCAGCTGGTATGTTGTCTGACTTTTTTGTGCTACTTTACTTTCCAAGAACAAATTGCATCTTTTTGGACATTACATTTCCAGTTATCCATATGAGCCTTACGCTCTTGGTCTCTGGTGCAGAAAATTCTGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATTCTTAAAGAGGTTCTCTCTGCAATTCAGAAGGGAAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTATCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACTGAATTCATGAAGCAATGGAATATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGATCTCTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTCTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGACTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTTTCTTCTGGACTGACTGCTCGCAAAAACCATAGCACAAGCACTGGCCCTGGGTGTGAATGGGCTGTTTCTGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAAGTTCGTGGTGATTACCTTCAACATGTGCTTCAGCCATTGTCTTCATGCTCTCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGGGTGGTCAATCATTAAAATCTTCAGAACCTTTAGTCATCAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTGAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTAGCTGTGAGGCATTCACCATATGTTTCAGGGGTTTTACGTCTCCTTAAGGCTTTTTTGGATGGGGACAGAGCTACAAGATATTTGGCCAGTGAAACTAGGAATGAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGTGTGGAGTATGCCCGTAACCTCTCTGCACTGGGGGTTGAAGCAGCCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAAATAGGCAAAACACAGTTAATCCTTGA 2247 0.4433 MADLIPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELREKIEQFRGSVEVSLVAIKNRLRQRSEVASARETLELLLDAFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNNLSNGVSVQHLENETSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNANLTVDASLGHCFVNGLEHRDATAIYNCLRAYAAIDNTKNAEEIFRITVVAPSVLKIIPHGPSAVVAGSSGDGLENDYQRIKECIDKDCKFLVEISSAGMLSDFFVLLYFPRTNCIFLDITFPVIHMSLTLLVSGAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHSTSTGPGCEWAVSAVIDDFIFVIHDIRYLEEQVRGDYLQHVLQPLSSCSPDVLESIRQSILLGGQSLKSSEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLAVRHSPYVSGVLRLLKAFLDGDRATRYLASETRNEILLCAATEITDRYYELAADLVSVEYARNLSALGVEAANIASYRSLWQCVAPANRQNTVNP 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1347 748 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 8 334 IPR009316 GO:0007030|GO:0015031|GO:0016020
Aed6g1347 748 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 364 711 IPR009316 GO:0007030|GO:0015031|GO:0016020
Aed6g1347 748 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 711 746 IPR009316 GO:0007030|GO:0015031|GO:0016020
Aed6g1347 748 PANTHER BNAA01G14200D PROTEIN 8 334 - -
Aed6g1347 748 Pfam COG complex component, COG2, C-terminal 627 710 IPR024603 -
Aed6g1347 748 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Aed6g1347 748 PANTHER BNAA01G14200D PROTEIN 364 711 - -
Aed6g1347 748 PANTHER BNAA01G14200D PROTEIN 711 746 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1347 K20289 - gmx:100817096 1236.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1347 6 18163273 18169849 Aed6g1347 6 18163273 18169849 ECH