Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1338 ATGGAGGTCGAACTCAAAGAGTTGCACGCCGATCTTCAATCCCTGAGCCAATCGCTTCCCGATCCATCTCACCGTGATTTGCTCCGCAAGATTCAATTGCGTGTTGAGGACCTTGCGAAGCTTGCAGCGGCTGCACCTGTTCGACGCTCTAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGGCTTATGGCACTTCAGAGAATGGGTATTGTGGAGAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGAATAGGTGGTGTAGGAAGTGTTGCAGCTGAGATGCTAACTAGATGTGGTATAGGTCGACTATTGTTGTATGATTATGACAAAGTGGAGCTTGCAAACATGAATAGGCTGTTCTTTCGACCAGATCAGGTTGGTATGACAAAGACTGATGCGGCTGTACAGACTCTTTCAGACATAAACCCTGATGTTGTACTTGAGAGCTATACACTGAATATCACCACCGTCACAGGTTTTGAAACCTTTATGTCAAGTTTGAAAAATAAGTCATTTTGCCCAAATAAACAAGGGAGTGGTGTGGATCTGGTTTTAAGTTGTGTGGATAATTATGAAGCAAGAATGGGCGTTAACCAGGCTTGTAATGAATTGAACCAAACATGGATGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAATTACTTATTCCTGGTGAAACTGCCTGTTTTGCATGTGCACCTCCTCTGGTTGTTGCATCTGGGGTAGATGAACGCACGCTCAAGCGTGAAGGGGTTTGTGCTGCATCTTTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTCCAAAACACACTAAAATTATTGTTAGGCTTTGGACAAGTCTCTCCATATTTGGGATATAATTCTCTTAAGGATTTTTTCCCAACTATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTATCTTGCTTGGAAAGACAGGAAGAGTACATGCTTGCAAAACCAGAAAGAGATGCTGCAGCCAAAGCAAAAATGGAATCTGAAGCAGCACTATCAACTGAGGAAGTGCCACTTCACGAAGATAATGAATGGAATATAAGTGTTGTTGGTGATGTTGAGCTGGATAGTCCGAATATCAGAAGTTCAGATGTTCTGCCGGAAGGTCTCACACATGAACTTCCTAGTGCAGAAGAGTTTCATAAGGCAACTCTTGACACTCCAGTAGTTGACAATGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG 1284 0.4338 MEVELKELHADLQSLSQSLPDPSHRDLLRKIQLRVEDLAKLAAAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKNKSFCPNKQGSGVDLVLSCVDNYEARMGVNQACNELNQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVSCLERQEEYMLAKPERDAAAKAKMESEAALSTEEVPLHEDNEWNISVVGDVELDSPNIRSSDVLPEGLTHELPSAEEFHKATLDTPVVDNDDLEDLRRQLEAINSA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1338 427 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 427 IPR045886 -
Aed6g1338 427 Gene3D - 82 344 - -
Aed6g1338 427 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
Aed6g1338 427 CDD ThiF_MoeB_HesA_family 64 312 - -
Aed6g1338 427 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Aed6g1338 427 Pfam ThiF family 65 319 IPR000594 -
Aed6g1338 427 Coils Coil 411 427 - -
Aed6g1338 427 PANTHER BNAANNG16230D PROTEIN 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1338 Aed-Chr6 18078055 18085674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1338 52 247 EF-hand Containing Proteins AT2G30110 26.442 6.76e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1338 K12164 - gmx:100819760 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1338 6 18078055 18085674 Aed6g1338 6 18078055 18085674 ECH