Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1309 ATGGAGGCTCCCGCATCCTACATTTCCTCCTCGGAACTCCGCAAGCACAACACGCGCGACGACGCGTGGATCTCTATCGACGGCAAGGTCTACGACGTCTCCTCCTGGCTCCACCGCCACCCAGGAGGCTCCCTCCCACTCCTCACCCTCGCCGGCGCCGACGCCACCGACGCCTTCCTCGCCTTCCACCCCACCTCCGCCTCCCTCCTCCTCCCCGCCTTCGCCACCCCGCACCTCCTCTCTGACCACTCCGTCTCCGCCGCCTCCTCCGACTACCGTCAACTCTTCTCCCAACTCTCCCAATCCGGCTTCTTCGACCGCAAGGGCCACACCACACTCATCCTCCTCACACTCATCTTCACCCTCCTCCCCCTCTGCATCTGCGCCGTCATCTTCTCCGACAGCACGTGCCTGCACGTGCTGTCCGCAGCACTCATCGGCTTCCTCTGGATCCAGAGCGGCTGGATAGGCCACGACTCCGGCCACTACAACGTCATGATCAACCGCCGCTACAACCGCGCCGTCCAGATTCTCTCCGGCAACGTCCTCGCCGGAATCAGCATCGCCTGGTGGAAGTGGAACCACAACGCCCACCACATTGCATGCAACAGCCTCGACTTCGACCCCGATCTTCAACACCTCCCCTTCTTCGTCGTCTCCTCTAGGTTTTTCAACTCCATCACTTCAAAATTCTACGACAGAAAAATGAACTTCGATTCCTTCTCTAGGTTCTTAGTCAGTTACCAGCACTGGAGTTTTTACCCTGTCATGTGCTTCGCTAGGATTAACCTCTTCGCTCAGTCTTTCATGCTGTTATTCTCTAAAAGAAAGGTGGAGAACAGAAAAAGTGAGCTTTTGGGAATGCTTGCGTTTTGGATTTGGTACCCTCTGTTGGTTTCTTGCTTGCCTAATTGGTGGGAGAGGCTTCTGTTTGTGTTTGTGAGCTTCTCCGTTACTGGAATTCAGCATGTGCAGTTCTGTTTGAACCATTTCTCTGCTGAGGTCTTCCTCGGGCCGCCGAGTGGTGGGGATTGGTTCGAGAAGCAGACCAAAGGGACGCTCGGCGTGTCGTGCTCTCCTTGGATGGACTGGTTTCATGGCGGATTGCAATTTCAGGTGGAGCATCATCTGTTCCCACGGCTGCCGCGGTGCCATTTGAGGAAGATTGCACCCTTGGTTAAGGATCTTTGCAAGAAGCATAATCTTCCATATAATTGTGTCTCTTTCTGGAAGGCCAATGTGCTGACGATTCAGACCTTGAGGAATGCTGCATTGCAGGCCAGAGACAGCTCGAAGCCGGTTCCTAGGAATTTGGTTTGGGAAGCTGTTAATACTCATGGATGA 1344 0.5506 MEAPASYISSSELRKHNTRDDAWISIDGKVYDVSSWLHRHPGGSLPLLTLAGADATDAFLAFHPTSASLLLPAFATPHLLSDHSVSAASSDYRQLFSQLSQSGFFDRKGHTTLILLTLIFTLLPLCICAVIFSDSTCLHVLSAALIGFLWIQSGWIGHDSGHYNVMINRRYNRAVQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSRFFNSITSKFYDRKMNFDSFSRFLVSYQHWSFYPVMCFARINLFAQSFMLLFSKRKVENRKSELLGMLAFWIWYPLLVSCLPNWWERLLFVFVSFSVTGIQHVQFCLNHFSAEVFLGPPSGGDWFEKQTKGTLGVSCSPWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDSSKPVPRNLVWEAVNTHG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1309 447 Gene3D - 2 76 IPR036400 -
Aed6g1309 447 SMART Cyt_b5_2 8 80 IPR001199 -
Aed6g1309 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 72 IPR036400 -
Aed6g1309 447 PANTHER FATTY ACID DESATURASE 2 4 446 IPR012171 GO:0016491
Aed6g1309 447 CDD Delta6-FADS-like 140 402 - -
Aed6g1309 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 80 IPR001199 -
Aed6g1309 447 Pfam Fatty acid desaturase 137 406 IPR005804 GO:0006629
Aed6g1309 447 PIRSF FA_sphingolip_des 1 434 IPR012171 GO:0016491
Aed6g1309 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 66 IPR001199 -
Aed6g1309 447 PANTHER DELTA(8)-FATTY-ACID DESATURASE 2 4 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1309 Aed-Chr6 17844636 17845979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1309 2 447 Lipid Metabolism Gene Families AT2G46210 61.435 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1309 K21737 - gmx:100775880 817.764