Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1304 ATGATGAAAAGTGTTGATTTAATTGTCACAGGACCAGTGTACTACAAAGGAGTCTACCACTTTTTCTACCAATTTAACCCTTATGCACCAACCTTTGGTAAGCATATGGTATGGGGTCATTCCATATCCTATGATCTCATCAATTGGATTCATCTAAACCATGCTATTGAACCAAGTGAGTCCTATGACATCAATGGCTGCTATTCTGGCTCAATCACAACCCTCCCTGGGGAAAAACCTGTTATTATGTACACAGGGAGTGATACTAACCAACATCAACTTCAGAACTTAGCTATGCCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAAAACCCTATCATGATTCCACCTAGTGGAATTGAAGTGGAGGGTTTTAGAGATCCAACAACTGCTTGGCATGGAAGTGATGGAAAATGGAGCGTAATTATTGGTGCCAAAAATGGTGAAGATGGCAAGGCTCTTCTCTACCATAGTGAGGATTTTGTTAATTGGAAACTTCACCCCAATCCTTTGTATGCATCAGACAACACTGGAATGTTTGAGTGTCCAGATTTTTTTCCAGTGTACATTAGTGGATCAAAGAGTGGTGTGGATACATCACTCCAAAACAGTAGTGTTAAGCATGTCTTGAAAATGAGTTATCAAAACAAACAACAAGAGTACTATTTTCTAGGTGAATATGTTCCTGATGAGGAAAAGTTTGTTCCTGATGCTGATTTGGAAGGAACTAGTTTGGACTTAATATTGGACCATGGAATGTTTTATGCTTCCAAGTCATTTTTTGACTATGCTAAAAACAGAAGGATATTGTGGGGATGGTCACAGGAGTGTGACACCACACAAGATGATTGCGAGAAAGGATGGGCTGGTCTACAGAGTATTCCAAGGCAAGTTTGGCTTGATGAAAGTGGGAAGAGATTGATGCAGTGGCCAATTGAAGAGGTAGAGAAACTACGTGACAAACAAATTAGTATAATGGGAGAGACACTGGTTGGTGGATCAACTCTTGAAGTCTTAGGTATCACAGCATCACAAGTTGATGTAGAAGTGTTGTTTGAGCTACCAGAACTAGAGAATGCAGAGTGGCTAGATGAAAATGAAGTTGATCCTCACATGCTGTGTAGTGAAGAATATGCATCAAGAAGTGGCATAATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCTGAGGACCAAACAGAACACACTGCAATCTTCTTTAGAATATATAGAGCTCCCAATAGATATGTATGCTTCATGTGCAGTGACCAAAGCAGGTCTTCATTGAGGAAGGACCTTGATAAAACCACATATGGAACCATCTTTGACATTGATCCCAATCTCAAAACGATTTCACTTAGAAGCTTGATTGATCGCTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGCATTACAAGTAGAGTTTATCCCTCGCTGGCTATAGACAAAGATGCACATCTTTATGTATTCAACAATGGAAGTCAGAGTGTGGAAATCTCAGAACTGAATGCTTGGAGCATGAAGCAAGCAGAATTTGGCCAAGAAGAAAGCATAAATAAGCTGTAG 1587 0.4008 MMKSVDLIVTGPVYYKGVYHFFYQFNPYAPTFGKHMVWGHSISYDLINWIHLNHAIEPSESYDINGCYSGSITTLPGEKPVIMYTGSDTNQHQLQNLAMPKNLSDPFLREWVKHPQNPIMIPPSGIEVEGFRDPTTAWHGSDGKWSVIIGAKNGEDGKALLYHSEDFVNWKLHPNPLYASDNTGMFECPDFFPVYISGSKSGVDTSLQNSSVKHVLKMSYQNKQQEYYFLGEYVPDEEKFVPDADLEGTSLDLILDHGMFYASKSFFDYAKNRRILWGWSQECDTTQDDCEKGWAGLQSIPRQVWLDESGKRLMQWPIEEVEKLRDKQISIMGETLVGGSTLEVLGITASQVDVEVLFELPELENAEWLDENEVDPHMLCSEEYASRSGIIGPFGLLALASEDQTEHTAIFFRIYRAPNRYVCFMCSDQSRSSLRKDLDKTTYGTIFDIDPNLKTISLRSLIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLYVFNNGSQSVEISELNAWSMKQAEFGQEESINKL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1304 528 Pfam Glycosyl hydrolases family 32 N-terminal domain 11 317 IPR013148 -
Aed6g1304 528 Gene3D Glycosyl hydrolase domain; family 43 9 329 IPR023296 -
Aed6g1304 528 SUPERFAMILY Arabinanase/levansucrase/invertase 10 318 IPR023296 -
Aed6g1304 528 SMART glyco_32 11 474 IPR001362 GO:0004553|GO:0005975
Aed6g1304 528 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 10 523 - -
Aed6g1304 528 CDD GH32_Fruct1-like 11 306 - -
Aed6g1304 528 Gene3D - 330 514 - -
Aed6g1304 528 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 10 523 - -
Aed6g1304 528 Pfam Glycosyl hydrolases family 32 C terminal 320 513 IPR013189 -
Aed6g1304 528 SUPERFAMILY Concanavalin A-like lectins/glucanases 317 516 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1304 Aed-Chr6 17817572 17820023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1304 15 519 Glycoside Hydrolase AT3G13790 53.891 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1304 - K01193 gmx:100806753 964.526