Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1303 ATGGAGATCAATGGAGAGGGTGCATCCCCACACAGCATAAATTCCATCAAGTTCAAGGTACCGGAGAAACAGCCTTATAGAACTTGGTACCACTTTCAACCCCCACAATATTGGATGAACGCACCTGTGTACTACAAAGGAGTTTACCACTTTTTCTACCAACACAACCCTTATGCAGCAACCTTTGGCGACAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATCAATTGGATTCATCTGAATCATGCTATTGAACCAAGTGAGTCCTATGACTTCAACAGTTGCTGGTCAGGCTCAGCCACAATACTTCTACTCCCAGGTGAAGAAGAACAACAACAAAAACCTGTTATTTTGTACACAGGAATTGATAACAATAAACACCAAGTTCAGAACATAGCTATACCAAAGGATCTATCAGACCCTTTCTTAAAGGAATGGGTGAAACATCCTCAGAACCCTGTCATGACTCCACCAAGTGGAGTTGAAATTGATAACTTCAGAGACCCTTCAACTGCTTGGCAAGGAAAAGATGGAAAATGGAGAGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGACAGTTCTTTACCAAAGTGAGGATTTTGTTAATTGGAAAGTGGAATTGAACCCTTTTTTTGCAACAGATAATACTGGTGTTTGTGAGTGTCCAGATTTTTTTCCTGTATCCATCAATAGTACATATGGGGTGGATACATCCGTGCAAAATCCAAGTGTTAGACAAGTCTTGAAGATAAGCTATCAAAGAACACTACATGATAACTATTTTCTCGGTAAATATGTCTATGATGAGGGAAACTTTGTTCCTGATGTTAAATTCACAGGAACTAGTTTGGATTTAAGGCTTGACTATGGTAAACTCTATGCTTCAAAGTCATTTTTTGACCATGCTAAGAACAGAAGGATATTGTGGGGGCAAGTTTGGCTTGATGAAAGTGGGAAGTGGTTGATGCAGTGGCCAATTGAAGAGGTACAAAAACTACGTGACAAACAAGTTAGCATATTGGGGGAGAAACTAGTTGGTGGATCAACTCTTGAAGTCTCAGGTATCACAGCATCACAGGTTGATGTAGAAGTGTTGTTTGAGCTACCTGAACTAGAGAATGCAGAGTGGCTAGATGAAAGTGAAGTTGATCCTCACTTGCTGTGTAGTGAAGAATATGCATCAAGAAGTAGCATGATAGGGCCATTTGGTTTGTTAGCTTTAGCTTCTGAGGACCAAACAGAACACACTGCAATCTTCTTTAGAATATATAGAGCTCCCAATAGATATGTATGCTTCATGTGCAGTGACCAAAGCAGGTCTTCATTGAGGAAGGACCTTGATAAAACCACATATGGAACCATCTTTGACATTGATCCCAATCTCAAAATGATTTCACTTAGAAGCTTGATTGATCGCTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGCATTACAAGTAGAGTTTATCCCTCGCTGGCTATAGACAAAGATGCACATCTTTATGTATTCAACAATGGAAGTCAGAGTGTGGAAATCTCAGAACTGAATGCTTGGAGCATGAAGCAAGCAGAATTTGGTCAAAAAGAAAGCATAAATAAGCTGTTAAAAAATCCAGTTGTCACCATTAAGTCATTTGATCATCTATGA 1665 0.3982 MEINGEGASPHSINSIKFKVPEKQPYRTWYHFQPPQYWMNAPVYYKGVYHFFYQHNPYAATFGDKMVWAHSVSYDLINWIHLNHAIEPSESYDFNSCWSGSATILLLPGEEEQQQKPVILYTGIDNNKHQVQNIAIPKDLSDPFLKEWVKHPQNPVMTPPSGVEIDNFRDPSTAWQGKDGKWRVVIGAQNGDEGKTVLYQSEDFVNWKVELNPFFATDNTGVCECPDFFPVSINSTYGVDTSVQNPSVRQVLKISYQRTLHDNYFLGKYVYDEGNFVPDVKFTGTSLDLRLDYGKLYASKSFFDHAKNRRILWGQVWLDESGKWLMQWPIEEVQKLRDKQVSILGEKLVGGSTLEVSGITASQVDVEVLFELPELENAEWLDESEVDPHLLCSEEYASRSSMIGPFGLLALASEDQTEHTAIFFRIYRAPNRYVCFMCSDQSRSSLRKDLDKTTYGTIFDIDPNLKMISLRSLIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLYVFNNGSQSVEISELNAWSMKQAEFGQKESINKLLKNPVVTIKSFDHL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1303 554 Pfam Glycosyl hydrolases family 32 C terminal 332 525 IPR013189 -
Aed6g1303 554 SUPERFAMILY Arabinanase/levansucrase/invertase 23 330 IPR023296 -
Aed6g1303 554 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 315 535 - -
Aed6g1303 554 SUPERFAMILY Concanavalin A-like lectins/glucanases 329 528 IPR013320 -
Aed6g1303 554 CDD GH32_Fruct1-like 37 321 - -
Aed6g1303 554 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 21 315 - -
Aed6g1303 554 SMART glyco_32 31 486 IPR001362 GO:0004553|GO:0005975
Aed6g1303 554 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 319 IPR013148 -
Aed6g1303 554 Gene3D - 342 526 - -
Aed6g1303 554 Gene3D Glycosyl hydrolase domain; family 43 36 341 IPR023296 -
Aed6g1303 554 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 21 315 - -
Aed6g1303 554 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 315 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1303 Aed-Chr6 17814608 17817265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1303 40 546 Glycoside Hydrolase AT1G55120 49.538 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1303 - K01193 gmx:100806220 991.104