Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1302 ATGAAGATCATTGCAGAGCTACTATTATTATTCGTGATAGTTCCTTTTCTGCTGCTGAACAGTGGAAATGGAATTGAAATATCCACACATAGCATCAATTATTATAGAGCACCTGAAAAACAACCGTACAGAACTTCTTATCACTTTCAGCCCCAACAAAATTGGATGAATGATCCAAATGGTGTTTACCACCTTTTCTACCAGCACAATCCTGAAGCAGCAACCTTTGGTGATAGGATTGTATGGGGTCACTCAGTATCCTATGATCTCATCAATTGGATTCATCTAAACAATGCTATTGAACCAAGTGGTCCATATGATATTAATAGCTGCTGGTCAGGCTCAGCCACTATAATTCCAGGGAAAGAACAACAACAACCTCTTATTTTGTACACAGGAATTGATGATAAGAAACATCAAGTTCAAAACTTGGCTATGCCAAGGAATCTATCAGATCCCTTCTTAAGGGAATGGATCAAACACCCTCAGAACCCTGTCATGATTCCACCAAGTGGAGTTGAAGTTGATAACTTCAGAGACCCTTCAACTGCTTGGAAGGGAAAGGATGGAAAATGGAGGGTAATCATTGGTGCACAAAATGGTGATGAAGGGAAGACAATTCTGTACCAAAGTGAAGATTTTGTTAATTGGAAAGTGGATCCTAATCCCTTTTATGCATCAGATAATACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTGTCCATCAATAGTACAAATGGGGTGGATACATCTGTGCAAAATCAAAGTGTTAGACATGTCTTGAAGATAAGCTATCTAACAAAGCAACATGATTACTATTTTCTTGGTAAATATGTATCTGATGAGGAAAACTTCATTCCTGATGTTAGGTTTACAGGAACTAGTTCGGACTTGAGGTATGACTATGGTAAATTCTATGCTTCTAAGTCATTTTTTGACTATGCCAAAAACAGGAGGATTCTGTGGGGGTGGGTGAGTGAGTCTGACTCCACACAAGATGACATTGAAAAAGGATGGGCTGGTCTACAGTCAATTCCAAGGCAAGTTTGGCTTGATAAAAGTGGGAAGAGATTGGTGCAGTGGCCAATTGAAGAAGTAGAAAAATTACATGACAAGCACATAAGTATAACGGGAGAAAAACTCGTGCATGGATCAACTCTTGAAGTATCAGGCATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGCTACCTGAGCTACAAAATGCTGAGTTTCTCGATCCCAATGGAGTTGATCCTCAACTACTCTGTAGCCAAGAGTCCTCATTGCTGCATGACCTTGACAAAACTACATATGGAACTATCTTGGACATAGATCACAATCTCAAAATGATTTCACTGAGAAGCTTGATTGACCACTCCATTATTGAGAGTTTTGGAGATGAAGGGAGAGTTTGTATCACTAGTAGAGTTTATCCATCATTGGCTATAGACAAAGGTGCACATCTTTATGCATTTAACTATGGAAGCCAGAGTGTGGTGGTCTCAAAACTCAACGCTTGGAGCATGAAGCATGCAGAGATTGGCCGTGAGGGAAACGTAAGTTATACCTAA 1581 0.3985 MKIIAELLLLFVIVPFLLLNSGNGIEISTHSINYYRAPEKQPYRTSYHFQPQQNWMNDPNGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLNNAIEPSGPYDINSCWSGSATIIPGKEQQQPLILYTGIDDKKHQVQNLAMPRNLSDPFLREWIKHPQNPVMIPPSGVEVDNFRDPSTAWKGKDGKWRVIIGAQNGDEGKTILYQSEDFVNWKVDPNPFYASDNTGVCECPDFFPVSINSTNGVDTSVQNQSVRHVLKISYLTKQHDYYFLGKYVSDEENFIPDVRFTGTSSDLRYDYGKFYASKSFFDYAKNRRILWGWVSESDSTQDDIEKGWAGLQSIPRQVWLDKSGKRLVQWPIEEVEKLHDKHISITGEKLVHGSTLEVSGITASQADVEVLFELPELQNAEFLDPNGVDPQLLCSQESSLLHDLDKTTYGTILDIDHNLKMISLRSLIDHSIIESFGDEGRVCITSRVYPSLAIDKGAHLYAFNYGSQSVVVSKLNAWSMKHAEIGREGNVSYT 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1302 526 Pfam Glycosyl hydrolases family 32 C terminal 429 511 IPR013189 -
Aed6g1302 526 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 428 519 - -
Aed6g1302 526 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 38 430 - -
Aed6g1302 526 ProSitePatterns Glycosyl hydrolases family 32 active site. 48 61 IPR018053 GO:0004553|GO:0005975
Aed6g1302 526 SUPERFAMILY Concanavalin A-like lectins/glucanases 363 514 IPR013320 -
Aed6g1302 526 Gene3D - 430 512 - -
Aed6g1302 526 Gene3D - 376 429 - -
Aed6g1302 526 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 38 430 - -
Aed6g1302 526 SUPERFAMILY Arabinanase/levansucrase/invertase 40 364 IPR023296 -
Aed6g1302 526 Pfam Glycosyl hydrolases family 32 N-terminal domain 48 363 IPR013148 -
Aed6g1302 526 SMART glyco_32 48 472 IPR001362 GO:0004553|GO:0005975
Aed6g1302 526 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV6 428 519 - -
Aed6g1302 526 CDD GH32_Fruct1-like 54 352 - -
Aed6g1302 526 Gene3D Glycosyl hydrolase domain; family 43 52 375 IPR023296 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1302 Aed-Chr6 17802626 17806282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1302 61 517 Glycoside Hydrolase AT3G13790 50.973 1.77e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1302 - K01193 gmx:100777487 958.362