Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1285 ATGAAGCTTTGGTGCTGTCCATGGCTATGCTTCACTGAAGAAGAAGAAGAACAAGAAGACCGCAACGTTCTCAAGCCTATGAAGGGAGAGGACATTTTCGGAAACGACGTCGTTGTTTCCGACGACGACGACGACGGAAATGATACCCGCCACCACGACGACCACCAATTCGCTATGGCCCGCGCCGATGCATTGGGCTCCTGGACCGGCGAGAGCAGCTCCGCCGCCGCCGCCGAGATTGCTGCCGTCGCAGGCGGCAGCGAGAGCCACAAGCGCGCCAAGTTCTACGCCGATTTCGAGGAGCCTCACTTTTCAGCGAATGCCGGGAAATGCGGTGCATCTAATGAATACGGTGACTATGACTATATTAAACGCACTCTTCGACCCAACGGTGATACTTGTTATGATGCATTTGCGTTGATGAGTGCGATTGAAGAGAGTAGCAGCTTCGATTCCAGCATTGTGAAAGAGGGTGATGGGGATGACAGTGATATCTCGAAAGTTGAAGATGTAGAGGTCAGAATGGATCTCACCGATGACTTGTTGCACATGGTTTTCTCGTTTTTGGATCATCCCAATCTCTGCAAAGCTGCCAGGGTTTGTAAGCAGTGGCGAGGTGCCAGTGCTCATGAAGATTTCTGGAAAAGTTTGAATTTTGAAGATCGGAACATATCTGTCGAACAATTTGAGGACATGTGTAGGCGTTATCCCAATGCCACAGCAGTGAGCATATCTGGTTCTGCTATTTACCTGCTTGTCATGAAAGCCATCTCTTCATTAAGGAATCTAGAGGTTCTAACATTAGGAAGAGGACAGATAGTTGATACTTTTTTCCATGCTTTAGCTGATTGCTCTATGTTGAGAAGATTGAATATCAATGATTCTACACTTGGCAATGGTATTCAGGAGATAACTATTAATCATGACAGATTGTGTCATCTTCAATTAACAAAATGCCGAGTGATGCGAATAGCAGTCAGGTGCCCACAACTAGAAACTATGTCGTTGAAGCGCAGTAACATGGCACAGGTTGTGCTTAATTGTCCACTTTTGCATGAGCTTGATATAGGCTCTTGCCACAAACTTCCTGATGCTGCAATAAGAGCTGCTGCAACTTCATGCCCTCAACTAGTCTCGCTGGACATGTCAAATTGTTCATGTGTCAGTGATGAAACTCTGCGTGAAATAGCAATGAGTTGTGCTAACCTTAGTTTTCTTGATGCATCATACTGCCCGAACATATCTTTGGAGTCTGTTAGACTGCAAATGTTGACAGTATTAAAGCTTCATAGTTGTGAGGGCATTACTTCTGCCTCAATGGCTGCAATAGCTCATAGTTATATGTTGGAGGTTTTGGAGCTTGACAATTGCAGCCTGTTGACTTCAGTGTCTTTGGATCTTCCTCGTTTGCAGACTATTAGATTGGTACATTGTCGCAAATTTGCTGATTTGAACTTAAGGACTATGATGCTTTCTTCTATATTGGTATCAAACTGCCCTGCACTCCATCGTATCAACATCACTTCAAATTCACTTCAAAAATTAGCATTGCAAAAGCAAGATAGTTTAACCATGTTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGACCTCTCCGAGTGTGAATCTTTGACAAACTCTATATGTGATGTTTTTAGTGATGGTGGAGGATGCCCTATGCTGAAATCACTAGTTCTTGATAATTGTGAGAGCTTGACATCAGTTCGGTTCATCAGCACCTCTTTAGTCAGTCTTTCCCTTGGTGGTTGTCGGGCAATTACTACTCTTGATCTTACCTGCCCTAACCTTGAGAAAGTCATTTTGGATGGTTGTGATCATTTGGAAAGAGCATCCTTTTGTCCTGTTGGCCTTCAGTCTCTCAATTTAGGAATATGTCCAAAATTGAATATACTCCACATAGAAGCCATGTTTATGGTCTCACTTGAGTTGAAAGGATGTGGTGTGCTGTCTGAAGCATCACTTAATTGTCCTCTCTTGACATCTTTGGATGCTTCCTTTTGCAGCCAACTCACTGATAAATTTTTGTCTGCAACAACGGCCTCATGCCCGTTGATTGAGTCATTAATATTGATGTCATGCCCATCAATTGGTTTAGATGGACTTTGTTCATTGCGTCGGCTCCCAAATTTGACCCTGCTGGATTTATCGTACACTTTTTTGGTCAATTTGCAGCCTGTTTTCGAGTCTTGTTCACAGCTAAAGGTATTAAAGTTGCAGGCATGCAAATATCTCACTGACTCATCACTTGAGCCTCTTTACAAAGGTGCTTTACCAGCACTTCAGGAGTTGGACTTGTCTTATGGAACACTGTGTCAGTCTGCCATAGAGGAGCTTCTTTCTTGCTGTACACACCTTACACGTGTGAGCTTGAATGGCTGTGCCAATATGCATGATTTAAACTGGGGATGCAGTCATGGGCATATTGCTGAATTGCCTAGTGTAAATTTCCTATCCATTGCAAGTTCCCATGAAAATATCCACGAGTTAAGTGAGCAACCCAGCCGGTCACTGCAGAACCTAAACTGTGTGGGATGTCCTAACATTCGGAAGGTTTTCATTCCATCAACGGCACATTGTTCCTGTTTGTTGTTTTTAAACCTTTCTCTATCAGCTAATTTGAAGGAAGTTGATGTAGCTTGTCTCAACCTAAGCTGGCTTAATCTAAGCAATTGTTCCTCTTTGGAAGTTTTGAAGCTAGAATGTCCGAGATTGACCAGTCTATTCCTTCAGTCTTGCAACATTGATGAGGAAGCTGTTGAGGCTGCTATATCAAAATGCACTATGCTGGAAACTCTTGATGTTCGCTTTTGTCCGAAGATAAGCTCAATAAGCATGGGAAGATTGCGTGCAGCATGTTCTAGTTTGAAGCGTATATACAGCAGCTTGTCAACTTCATAA 2919 0.4337 MKLWCCPWLCFTEEEEEQEDRNVLKPMKGEDIFGNDVVVSDDDDDGNDTRHHDDHQFAMARADALGSWTGESSSAAAAEIAAVAGGSESHKRAKFYADFEEPHFSANAGKCGASNEYGDYDYIKRTLRPNGDTCYDAFALMSAIEESSSFDSSIVKEGDGDDSDISKVEDVEVRMDLTDDLLHMVFSFLDHPNLCKAARVCKQWRGASAHEDFWKSLNFEDRNISVEQFEDMCRRYPNATAVSISGSAIYLLVMKAISSLRNLEVLTLGRGQIVDTFFHALADCSMLRRLNINDSTLGNGIQEITINHDRLCHLQLTKCRVMRIAVRCPQLETMSLKRSNMAQVVLNCPLLHELDIGSCHKLPDAAIRAAATSCPQLVSLDMSNCSCVSDETLREIAMSCANLSFLDASYCPNISLESVRLQMLTVLKLHSCEGITSASMAAIAHSYMLEVLELDNCSLLTSVSLDLPRLQTIRLVHCRKFADLNLRTMMLSSILVSNCPALHRINITSNSLQKLALQKQDSLTMLALQCQSLQEVDLSECESLTNSICDVFSDGGGCPMLKSLVLDNCESLTSVRFISTSLVSLSLGGCRAITTLDLTCPNLEKVILDGCDHLERASFCPVGLQSLNLGICPKLNILHIEAMFMVSLELKGCGVLSEASLNCPLLTSLDASFCSQLTDKFLSATTASCPLIESLILMSCPSIGLDGLCSLRRLPNLTLLDLSYTFLVNLQPVFESCSQLKVLKLQACKYLTDSSLEPLYKGALPALQELDLSYGTLCQSAIEELLSCCTHLTRVSLNGCANMHDLNWGCSHGHIAELPSVNFLSIASSHENIHELSEQPSRSLQNLNCVGCPNIRKVFIPSTAHCSCLLFLNLSLSANLKEVDVACLNLSWLNLSNCSSLEVLKLECPRLTSLFLQSCNIDEEAVEAAISKCTMLETLDVRFCPKISSISMGRLRAACSSLKRIYSSLSTS 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1285 972 PANTHER OS10G0396666 PROTEIN 90 933 - -
Aed6g1285 972 SUPERFAMILY F-box domain 176 207 IPR036047 GO:0005515
Aed6g1285 972 Pfam F-box-like 179 219 IPR001810 GO:0005515
Aed6g1285 972 ProSiteProfiles F-box domain profile. 171 217 IPR001810 GO:0005515
Aed6g1285 972 SUPERFAMILY RNI-like 199 464 - -
Aed6g1285 972 SUPERFAMILY L domain-like 639 966 - -
Aed6g1285 972 SUPERFAMILY RNI-like 421 640 - -
Aed6g1285 972 PANTHER OS10G0396666 PROTEIN 90 933 IPR044703 GO:0010252|GO:1905393
Aed6g1285 972 SMART fbox_2 177 217 IPR001810 GO:0005515
Aed6g1285 972 Gene3D Ribonuclease Inhibitor 168 418 IPR032675 -
Aed6g1285 972 Gene3D Ribonuclease Inhibitor 419 579 IPR032675 -
Aed6g1285 972 Gene3D Ribonuclease Inhibitor 729 881 IPR032675 -
Aed6g1285 972 Gene3D Ribonuclease Inhibitor 580 728 IPR032675 -
Aed6g1285 972 SMART LRR_CC_2 663 688 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 908 932 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 600 630 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 933 958 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 284 307 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 689 714 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 374 399 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 467 492 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 737 762 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 558 588 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 530 554 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 421 446 IPR006553 -
Aed6g1285 972 SMART LRR_CC_2 348 373 IPR006553 -
Aed6g1285 972 Gene3D Ribonuclease Inhibitor 882 971 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1285 Aed-Chr6 17624910 17633124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1285 - - gmx:100782842 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1285 6 17624910 17633124 Aed6g1285 6 17624910 17633124 ECH