Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1282 ATGGGTGAAGCTCCAGAGGTTTTCTACATTAATGGGTTCTCAGAGTTTGATAAAATTGAAACCCAACAAAACCATGATTCTTCTTGGTACGAGGAATTCATCGACGATGATCTCAAATGGTCTTTTAAACTCAACAGTGTGCTCCATAAAGCCATTAGCGAGTACCAGGACATAGCTCTCTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGATGGAAAGATGCAGAGTGCTGAAACGGACGAATTTATTTATCACGAATGTTTGATTCATCCCCCACTTTTATGCCATCCTAATCCCAAGACTGTGTTTATAATGGGAGGAGGTGAAGGCTCTTCTGCTAGGGAAGCCCTTAAGCACAGGTCAATGGACAGAGTGGTCATGTGCGACATAGACAAGATTGATGAGGCCGCTCAAATAGAGGCTGAATTGGAGAAGAGAAAGGAGAAGTTCGATATCATTGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTTTACAAGAAGATCCTGAAGCCCAAGCTCAATGATAATGGGATTTTTGTGACCCAGGCTTCGGACCAACCACTATCGATTTGTGCTGATGAAATGGACAAAAGAATCGAAGCAAGAATAGATGGGGAACTTCTCTATCTAGATGGTGCTTGGTTTCATTCATCTACAACCATGAATAAAACTGTTTACCAATCGCTACATAATGAAACTCATGTGTACACTGAAGAAAATGCTAGATTTATTCCTGGACATGGCATGGCTTTTCGACTCTAA 798 0.4185 MGEAPEVFYINGFSEFDKIETQQNHDSSWYEEFIDDDLKWSFKLNSVLHKAISEYQDIALLDTKRFGKALVLDGKMQSAETDEFIYHECLIHPPLLCHPNPKTVFIMGGGEGSSAREALKHRSMDRVVMCDIDKIDEAAQIEAELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYKKILKPKLNDNGIFVTQASDQPLSICADEMDKRIEARIDGELLYLDGAWFHSSTTMNKTVYQSLHNETHVYTEENARFIPGHGMAFRL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1282 265 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 27 134 IPR030374 -
Aed6g1282 265 PANTHER BNAA02G04280D PROTEIN 141 196 - -
Aed6g1282 265 PANTHER BNAA02G04280D PROTEIN 195 264 - -
Aed6g1282 265 PANTHER BNAA02G04280D PROTEIN 1 134 - -
Aed6g1282 265 CDD AdoMet_MTases 108 194 - -
Aed6g1282 265 Pfam Spermidine synthase tetramerisation domain 29 80 IPR035246 -
Aed6g1282 265 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 28 241 IPR029063 -
Aed6g1282 265 Gene3D Spermidine synthase, tetramerisation domain 27 79 IPR037163 -
Aed6g1282 265 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 1 134 - -
Aed6g1282 265 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 141 196 - -
Aed6g1282 265 Hamap Polyamine aminopropyltransferase [speE]. 28 261 IPR001045 GO:0003824
Aed6g1282 265 Pfam Spermine/spermidine synthase domain 83 134 - -
Aed6g1282 265 Gene3D Vaccinia Virus protein VP39 137 264 IPR029063 -
Aed6g1282 265 Gene3D Vaccinia Virus protein VP39 80 135 IPR029063 -
Aed6g1282 265 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 195 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1282 Aed-Chr6 17554381 17558537 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1282 K18787 - gmx:100784972 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1282 6 17554381 17558537 Aed6g1282 6 17554381 17558537 ECH