Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1280 ATGTACAATCTAGTAGAGAAGCCACAAAGAGATGACACCAAGTTCCTAACGCCATCTTTTTCTTCCACCCTCCTAGACAAAATTTACCGTTCAATTGACGAGGGTGAGAGACCAAATGGCGAAACCAAGTTTTACAGACACACCACAATGAGACAGAGCAGAAGCAGTTCGAAATCGATGGACGCTAGTTCAGACAGAAAAATCGTCGGCACAAAAAAAACCGACAGAAATAGTAGTAGTACTAAACTGCACCGCGACGAGGAGGTCATGTTCTTCAGCTCCACCTCTATTTCCTCGGATTCTAGCTTCGGATTCTCCTCCTCCGACACCGAGTCCATCTCACGCGCCTCGTGTTTCGCGCCGAGGGCCGCGCGAGGAGGGAGCGCGTCGTTCCGCTCCGAGAAACAGGGAATGCGCGTGTTCGAAGGTTTCTGTCGGCACTCCCACACCTCGGATGAGGAGGAAAGACAACAACAGCAACAGCGACGACACGTGGCGGCGGCTCCTCGCGACGAGGAGGCGGCGCTGATGATCAAATCCAAGTCGCGCGCGTTGAAGATTTACAACAACCTTAAAAAAGTGAAACAGCCGATTTCCCCCGGCGGCAGGGTCACGAGTTTCCTCAACTCGCTCTTCGCCAACACCACGAAGAAAACCACCACGACGACGACCACGAGTTCCCGCACGTGCCGCGAAGTGAATGCTAATGCTCCTTCTTCTTCATCTTCTTCCTCTTGCTATTATTCTTCCACGTGCTCCTCTGCTTCTTCGTTCTCACGTTCCTGCTTGAGCAAGACCATGTCTTCCGAAAGGGACAGGTTGCGCAATGGCGTGAAGAGAACGGTGCGTTTTTACCCCGTGAGTGTGATCGTGGGCGAAGATAGTAGACCCTGTGGCCACAAACGCTTGTGCGAAGAGGAAGAGGCTTCTAGAGAGTTCTTAAGAGAGTACAACCGACACACCCCCAAGTTGAAGGACTTGTCTTTAAGGTCTAACGTTGTAGTTGATGATGGTGACGAGGATGACGATGATGCATCGAGTTATGCTAGCTCCGATCTCTTTGAGCTTGATCATATGGCTGTGTTTGGAAGTGGTAGGTATAGTGAGGAGCTTCCCGTGTATGAAACAACTCATGTTAGTACTAACCGCGCCATTGCTAATGGCCTCATAGTGTAA 1176 0.5085 MYNLVEKPQRDDTKFLTPSFSSTLLDKIYRSIDEGERPNGETKFYRHTTMRQSRSSSKSMDASSDRKIVGTKKTDRNSSSTKLHRDEEVMFFSSTSISSDSSFGFSSSDTESISRASCFAPRAARGGSASFRSEKQGMRVFEGFCRHSHTSDEEERQQQQQRRHVAAAPRDEEAALMIKSKSRALKIYNNLKKVKQPISPGGRVTSFLNSLFANTTKKTTTTTTTSSRTCREVNANAPSSSSSSSCYYSSTCSSASSFSRSCLSKTMSSERDRLRNGVKRTVRFYPVSVIVGEDSRPCGHKRLCEEEEASREFLREYNRHTPKLKDLSLRSNVVVDDGDEDDDDASSYASSDLFELDHMAVFGSGRYSEELPVYETTHVSTNRAIANGLIV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1280 391 PANTHER PROTEIN BIG GRAIN 1-LIKE B 1 65 - -
Aed6g1280 391 PANTHER PROTEIN BIG GRAIN 1-LIKE B 71 391 - -
Aed6g1280 391 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 71 391 IPR039621 GO:0009734
Aed6g1280 391 MobiDBLite consensus disorder prediction 49 64 - -
Aed6g1280 391 MobiDBLite consensus disorder prediction 48 82 - -
Aed6g1280 391 MobiDBLite consensus disorder prediction 65 82 - -
Aed6g1280 391 MobiDBLite consensus disorder prediction 148 171 - -
Aed6g1280 391 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 65 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1280 Aed-Chr6 17519547 17520722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1280 - - gmx:100798431 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1280 6 17519547 17520722 Aed6g1280 6 17519547 17520722 ECH
Aed4g1676 4 21282090 21283202 Aed6g1280 6 17519547 17520722 ECH
Aed6g2136 6 23795928 23797357 Aed6g1280 6 17519547 17520722 ECH
Aed2g0357 2 2428723 2429991 Aed6g1280 6 17519547 17520722 ECH