Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1251 ATGGCTGATCAATTCACAGAAAATTTGCAAAGCATTATTGGACCTTCATTTCCATTCTTAGACATTGATCCAAGCATGGAACTCCTAAACCAATTCATAGGGATGAACCAATTGTATATGCTAGAGAATTCAAACTTAATACCTTTTTCTCGTGACACCTTCTTAGGTCCCCAAGAACCTGAGTTTCCAGGAAACTTGGAAGAAGATTTCCCTTTTCTCTTCCATAATGTCAACAACCACAATGCACTTCCTGTTTCTCTAGATCTCCCAATTTTGCAAGCAGAAAATGAGGTCCATGAAGGTAAAAAGAGGAAATCAATGGATCTACCTGACTCCAGTTCAGCTAATAACTCAACTCCTGCAGTTTCTGAGAGTGGAAGCAAGACCAAACATGTGAGAAGAGGGAAAATCAAAGAGAAATTAAGGTGCTTACAGAATATTGTTCCAGGGTGTTACAAGACAATGGGCATGGCAGTAATGTTGGATGAAATCATACACCATGTGCAGTCCTTGCAGCATCAAGTAGATTTCCTTTCTTTGAAGCTTACTGCAGCAAGTTCCTTTTATGACTTCAATTCCGAGATAGATGCTTGGAAGTTGGAAACAATGCAGATCTATCTATTCTATTATCTATCGTTCATTGTCGTTTTGATCTCGAACGCCATGGCGTTTTGGAGATCCCTCGCGTTCTCTGCGATCCTTCTTTCGCTCTTCGTCCATGGCGCTCTCTGCTTCTACCTCCCCGGCGTCGCTCCACAGGACTTCCAGAAGGGAGATCCATTGCAAGTGAAAGTAAACAAATTGACTTCAACAAAGACCCAGCTTCCATATACATATTATTCTCTTCCTTATTGTCCGCCAAATAAAATAGTCGATAGTGCTGAAAATCTTGGAGAAGTGCTTCGTGGTGATCGCATCGAAAATTCTCGTTATGTGTTTAAAATGCGTGAACCACAAATGTGCAATATTGTGTGTAAGCTTAAACTTGATGCGAAAACTGCAAAAGAGTTCAAAGAGAAGATTGATGATGAGTATAGAGTGAACATGTATGGCATTCAGATCCTTGATAACCTTCCTCTGGTTGTTCCCATAAAACGGTTGGATTCGGACTCTATTGTTTATCAACTTGGTTTCCATGTTGGACTTAAAGGGCAGTATAGTGGGAGCAAGGAGGAGAAGTATTTCATTCACAACCATTTGGCTTTTACTCTCAAGTATCATAGAGATACACTAACTGAATCTGCTAGAATTGTGGGCTTCGAGGTTCAGGCATTCAGTGTTAAACATGAATTTGAAGGAAAGTGGGATGAAAAGACCACCCGTTTGACAACTTGTGACCCTCATGCTAAACACACAGTTGTCAATTCCAACAATCCTCAAGAGGTCGAAGAGAACAAGGAAATTATCTTCACATATGATGTTGATTTCCAGGAGAGTGATGTGAAGTGGGCTTCAAGATGGGATGCCTATTTGCTGATGAGTGATGACCAAATTCACTGGTTCTCAATTGTGAACTCATTGATGATTGTTCTCTTCCTCTCGGGTATGGTAGCAATGATAATGCTGCGTACACTTTACCGTGACATTTCAAAGTACAATGAGTTAGAGACCCAAGAAGAGGCACAAGAAGAGACTGGTTGGAAGCTTGTCCATGGCGATGTTTTTAGGCCACCAAACAACTCAGATTTGCTGTGTGTTTATGTTGGAACTGGTCTTCAGTTTTTTGGGATGATCCTAGTAACAATGATGTTTGCTGTCCTAGGGTTCCTTTCTCCTTCCAACCGAGGTGGGCTAATGACAGCCATGCTCTTACTCTTTGTTTTCATGGGGATTTTTGCTGGCTATGCCTCTGCTCGCTTATATAAAATGTTCAAAGGAACAGAGTGGAAGAAAATTGCCCTCAGAACTGCAATCATGTTCCCTGCAACTGTTTCTGCCATTTTCTTTGTCTTAAATGCTCTCATATGGGGACAAAAATCATCTGGAGCTGTGCCATTTGGAACAATGTTTGCCCTGATCTTTTTATGGTTTGGGATCTCAGTTCCACTTGTTTTTGTGGGTGCCTATGTTGGATTTAAGAAACCCGCAATTGAGAATCCAGTGAAGACAAACAAAATCCCAAGGCAAATCCCCGAGCAGGCATGGTACATGAATCCAGTCTTCTCAGTTCTGATCGGAGGAATACTCCCATTTGGAGCTGTTTTCATTGAGCTTTTCTTCATCCTCACTTCAATCTGGTTGAATCAGTTTTACTACATCTTCGGATTCCTCTTCTTGGTCTTTGCCATCCTCATCGTCACTTGCGCCGAAATCACCATCGTGCTTTGCTACTTCCAGTTGTGCAGTGAGGATTACTTATGGTGGTGGCGATCATACCTCACATCTGGCTCTTCTGCTCTATACCTCTTTCTTTACGCCACATTCTACTTCTTCACCAAGCTTGAAATCACAAAGTTGGTATCTGGGTTACTGTACTTTGGTTACATGCTTATAGCATCCTATGCCTTCTTTGTTGTAACCGGATCCATCGGATTTTACGCCTGCTTTTGGTTCACAAGGCTCATCTACTCTTCAGTCAAGATTGATTGA 2589 0.4164 MADQFTENLQSIIGPSFPFLDIDPSMELLNQFIGMNQLYMLENSNLIPFSRDTFLGPQEPEFPGNLEEDFPFLFHNVNNHNALPVSLDLPILQAENEVHEGKKRKSMDLPDSSSANNSTPAVSESGSKTKHVRRGKIKEKLRCLQNIVPGCYKTMGMAVMLDEIIHHVQSLQHQVDFLSLKLTAASSFYDFNSEIDAWKLETMQIYLFYYLSFIVVLISNAMAFWRSLAFSAILLSLFVHGALCFYLPGVAPQDFQKGDPLQVKVNKLTSTKTQLPYTYYSLPYCPPNKIVDSAENLGEVLRGDRIENSRYVFKMREPQMCNIVCKLKLDAKTAKEFKEKIDDEYRVNMYGIQILDNLPLVVPIKRLDSDSIVYQLGFHVGLKGQYSGSKEEKYFIHNHLAFTLKYHRDTLTESARIVGFEVQAFSVKHEFEGKWDEKTTRLTTCDPHAKHTVVNSNNPQEVEENKEIIFTYDVDFQESDVKWASRWDAYLLMSDDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNELETQEEAQEETGWKLVHGDVFRPPNNSDLLCVYVGTGLQFFGMILVTMMFAVLGFLSPSNRGGLMTAMLLLFVFMGIFAGYASARLYKMFKGTEWKKIALRTAIMFPATVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGAYVGFKKPAIENPVKTNKIPRQIPEQAWYMNPVFSVLIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFAILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLEITKLVSGLLYFGYMLIASYAFFVVTGSIGFYACFWFTRLIYSSVKID 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1251 862 Gene3D - 126 182 IPR036638 GO:0046983
Aed6g1251 862 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 187 IPR036638 GO:0046983
Aed6g1251 862 MobiDBLite consensus disorder prediction 100 131 - -
Aed6g1251 862 MobiDBLite consensus disorder prediction 110 126 - -
Aed6g1251 862 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 121 171 IPR011598 GO:0046983
Aed6g1251 862 Pfam Endomembrane protein 70 276 818 IPR004240 GO:0016021
Aed6g1251 862 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 225 862 - -
Aed6g1251 862 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 225 862 IPR004240 GO:0016021
Aed6g1251 862 SUPERFAMILY MFS general substrate transporter 500 686 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1251 Aed-Chr6 17330325 17339399 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1251 232 862 Miscellaneous Gene Families AT5G10840 84.676 0.0 1097
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1251 K17086 - gmx:100810506 1249.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1251 6 17330325 17339399 Aed6g1251 6 17330325 17339399 ECH