Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1249 ATGCAGAGATTCAAAGCTCTGCTTCCGCAAACTAGGTCCTCAATTCGCACTCTCTGTTCTCACCGTCGAGCTTTCTCTGCTCAACCAAATTACGCAGAGCACAACGACGACGATTCTCAGGAACAGATTTTAGTCGAAGGAAGAGCGAAATCGCGAGCAGCTATTCTCAACAGGCCGTCTTCGCTGAACTCGCTCAATGCTTCAATGGTTGCTCGGTTGAAGAGACTGTATGATTCCTGGGAAGAAAACTCTGATATTGGCTTCGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTGTTAGGCTGTATCACTCACTCAATGAAGGAAATACTGACGAAGCTGAACGGTTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACATATCTTAAACCACATGTTGCCATTTTGGATGGCATAACAATGGGATGTGGATCTGGAATTTCTCTACCCGGGATGTTCCGTGTGGTAACTGATAAAACTATTTTTTCTCACCCAGAAGCTCAAATAGGTTTCCACCCAGATGCAGGAGCTTCTTATATTTTGTCTCATCTACCTGGCTACTTAGGGGAATACTTGTCCCTTACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCCGCCTTGCTACTCATTATTCATTAAATGCAAGGCTTTCTTTGCTTGAAGAACGTCTTGGTAAACTTGTCACAGATGAACCTTCCGTTGTAGAGGCATCCCTTGCACAGTATGGTGATCTTGTTTATCCAGATTTGAGCAGTGTCCTTCACAGGATTGATACTATTGATAGATGTTTCAGTCATGAAACTGTGGAGGAAATTGTTGAAGCTTTGGAGAAAGAGGCTGCCGAGTCTAATGATGAATGGTGCTCGTCTGCTCTAAGGAGAATGAGAGAAGCCTCCCCGTTGAGTTTGAAAGTTACTTTGCAATCTATACGTGAAGGTAGATTTGAAACTCTAGATAAATGTCTTGTACGTGAGTACCGCATGTCCCTACGTGGAATCTCAAAGCATGTCTCCTCTGATTTCTTTGAGGGTGTTCGAGCACGAATGGTTGACAAAGATTTTGCACCAAAGTGGGACCCGCCTAGTTTAAAAGATATATCAGAGGACATGGTTGAATACTATTTCTCTCCTTCAAGTGAAGTTGAATCTGAACTAGTGCTTCCAACGGCTTTGCGAGAACCTTACATGTGA 1221 0.4292 MQRFKALLPQTRSSIRTLCSHRRAFSAQPNYAEHNDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVARLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVVRLYHSLNEGNTDEAERFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTIFSHPEAQIGFHPDAGASYILSHLPGYLGEYLSLTGDKLNGVEMIACRLATHYSLNARLSLLEERLGKLVTDEPSVVEASLAQYGDLVYPDLSSVLHRIDTIDRCFSHETVEEIVEALEKEAAESNDEWCSSALRRMREASPLSLKVTLQSIREGRFETLDKCLVREYRMSLRGISKHVSSDFFEGVRARMVDKDFAPKWDPPSLKDISEDMVEYYFSPSSEVESELVLPTALREPYM 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1249 406 CDD crotonase-like 56 220 - -
Aed6g1249 406 Coils Coil 276 296 - -
Aed6g1249 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 23 406 IPR032259 GO:0003860
Aed6g1249 406 SUPERFAMILY ClpP/crotonase 48 371 IPR029045 -
Aed6g1249 406 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 2, MITOCHONDRIAL 23 406 - -
Aed6g1249 406 Gene3D - 36 400 - -
Aed6g1249 406 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1249 Aed-Chr6 17291964 17299639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1249 1 406 Acyl Lipid Metabolism Gene Families AT4G31810 69.343 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1249 K05605 - gmx:100808892 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1249 6 17291964 17299639 Aed6g1249 6 17291964 17299639 ECH