Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1248 ATGATGATTCGATTTCCATTGGTGGTTGCTCTTGTTGTGTTGATGATTTGTGGCATGAGATGCAGAATGGCAAAAGCATCAGAACAAAGTACTGATTCTGGGAATGTGTACACGCTTGCTTCAGTGAGGGAGGATTTGGTTAGGCAAGAGGATACCATCATCTATGGTCTCATTGAGAGAGCCAAGTTCCCTAGCAACTCTCATGCCTATGATGAAAACTATGCTCAAATCGAAGGGTTTTGTGGCTCATTGGCGGAATTTGTTGTTAAGAACTCAGAGGCCATTCAAGCTAAGTTTTTGCATCCTGGAGCTGCTTCAGTCAACATAAACAAGTCCATCTGGAAAATGTATTTCCAAGACTTACTTCCATTGCTTGCTACTTCGGGTGATGATGGCAACTATGCGCAAACTGCAGCTAATGATCTTTCATTATTGCAGGCCATCTCTAGAAGGGTTCACTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATGCTCCTCAAGACTACGAGCCTTTAATTCGATCTAAGGACAAAGAGGGATTGATGAAATTGTTGACATTTGCGAGCGTTGAAGAGACGGTGAGGAAGAGGGTTGAGAAGAAGGCCGCGGTGTTTGGGCAAGAAGTGAGTCTTGACAGTAATGATGATGGTGACAATAATGAAAATCAGAAGTTTGATCCATCTGTGGCTTCTGGCTTGTACAAAAATTGGGTGATACCTCTTACCAAGGAGGTTCAGGTTGAGTACCTCTTGCGCCGTCTAGATTGA 771 0.4345 MMIRFPLVVALVVLMICGMRCRMAKASEQSTDSGNVYTLASVREDLVRQEDTIIYGLIERAKFPSNSHAYDENYAQIEGFCGSLAEFVVKNSEAIQAKFLHPGAASVNINKSIWKMYFQDLLPLLATSGDDGNYAQTAANDLSLLQAISRRVHYGKFVAEVKFRDAPQDYEPLIRSKDKEGLMKLLTFASVEETVRKRVEKKAAVFGQEVSLDSNDDGDNNENQKFDPSVASGLYKNWVIPLTKEVQVEYLLRRLD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1248 256 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 100 256 IPR037039 GO:0004106|GO:0009073
Aed6g1248 256 ProSiteProfiles Chorismate mutase domain profile. 30 256 IPR008238 GO:0004106|GO:0009073
Aed6g1248 256 TIGRFAM CM_pl-yst: chorismate mutase 98 256 IPR008238 GO:0004106|GO:0009073
Aed6g1248 256 PANTHER CHORISMATE MUTASE 98 256 - -
Aed6g1248 256 PANTHER CHORISMATE MUTASE 10 98 - -
Aed6g1248 256 PANTHER CHORISMATE MUTASE 10 98 IPR008238 GO:0004106|GO:0009073
Aed6g1248 256 SUPERFAMILY Chorismate mutase II 31 256 IPR036263 GO:0046417
Aed6g1248 256 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 31 99 IPR037039 GO:0004106|GO:0009073
Aed6g1248 256 PANTHER CHORISMATE MUTASE 98 256 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1248 Aed-Chr6 17287706 17291342 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1248 K01850 - gmx:100791341 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1248 6 17287706 17291342 Aed6g1248 6 17287706 17291342 ECH
Aed6g1248 6 17287706 17291342 Aed4g1733 4 21690110 21692036 PCT