Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1233 ATGCAACCCCTTCTTCTGGTGCGAGGGTTTCTGCTAAAAGGGGTGGCAAGGGAGAGTGAAAGAACAAAAAAGGAAATTTCTTTGCGTTTTGAAGTCTCAAGTTTCATGTTTTCTTCTAAAGGGTGGTTTGCTCCAAACATCTGGTCAATGGAACATAAAAGTAGTTTGAAAAGAAAGTCCCCAGAGAGTGGAGAGCATGTACTCTTCAACAACTTTTCTCTGGATGACCTTAATGAAGATCTCTTGGAGAGGGTACTTTCATGGCTACCAACTTCCTCGTTTTTTCGCCTTACTTCTGTGTGCAAAAGGTGGAAATCAGCTGCTGCTTCTGTGAGTTTCAAGCTTGCCTGCTCACACGTTCCGTCGCGGGACCCTTGGTTTTTGATGGTTGCTCCCAACCTCAACCAATCTATTGTCTTTGACACTGCTGAAAACAGTTGGAAAAGACTCGATCACCCACGTCTTCTTCCGCTTGAAGACTCTAGCATTAGCTGCATGCCTGTTGCAGCCTCTGGTGGCCTGGTTTGCTACCGCAAACCATCAGGAAACTTCATTGTGTGCAATCCTGTGACCGGATCTTGTACCAAACTCCCTCCGTTGCATTTTGCCCCAGAGAATCATCCTCTCAATGCAGTTGTGATGAGTACAGCTTTCAAGGATCAAATGTCCTACAAGATTGTGTTAGTCTTCGGCGAACTCCCGAACCTTTTGTTTAAAGTCTACAACTCTGGCTCGGGTGGTTGGGAAGATGATGCTGCACTGAGGAGGAATGTTGACAATGATAATTCCATGGATTGTGATTCAACTGACGATGACAATGTTGTGTACTTCCTTAGCAAGGCTGGAACTGTGGTGGCGAGTAGCATGCAGAGAAGTCCAACTAAGCAGTATTCGTCGGTCATTACTAACAAAGATGGTGAGGAGATAGTGTATTTTCTCAGCTCCTCGGGGACGGTAGTAGCTTGCAATTTGACATCCAAGTGCTTCTCAGAGTACCCACGGTTGCTCCCTGTTTTCAGCGAGTACTCCATCGATATTGTGGAGTGTGGCAGCGAGATGCTGGTTGTTTTGCTATCCGAATTCTTGGAGAGCACAAGTCTTAGGGTGTGGAAAAATGACGAGGCTAATCGAAGCTGGCAGCAGATTGCTGCAATGCCTGCAGCAATGTCTCAAGAGTGGTATGGAAAGAAGGCAGATATCAACTGCGTTGGAGCGGGTGATCGGATATTTATATGCCTGAACTCCCCTGAGCTGTGTACTTATGTTCTGTGTGATTTGGTGACCAACAAATGGACCGAGTTGTCAAAGTGTTGCTTGAATGGAGAAGTCATGGAGTTCATGTCAGCCTTTTCATTTGAGCCAAGGATAGAAGCTTCTGTATAA 1383 0.4584 MQPLLLVRGFLLKGVARESERTKKEISLRFEVSSFMFSSKGWFAPNIWSMEHKSSLKRKSPESGEHVLFNNFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASVSFKLACSHVPSRDPWFLMVAPNLNQSIVFDTAENSWKRLDHPRLLPLEDSSISCMPVAASGGLVCYRKPSGNFIVCNPVTGSCTKLPPLHFAPENHPLNAVVMSTAFKDQMSYKIVLVFGELPNLLFKVYNSGSGGWEDDAALRRNVDNDNSMDCDSTDDDNVVYFLSKAGTVVASSMQRSPTKQYSSVITNKDGEEIVYFLSSSGTVVACNLTSKCFSEYPRLLPVFSEYSIDIVECGSEMLVVLLSEFLESTSLRVWKNDEANRSWQQIAAMPAAMSQEWYGKKADINCVGAGDRIFICLNSPELCTYVLCDLVTNKWTELSKCCLNGEVMEFMSAFSFEPRIEASV 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1233 460 PANTHER F-BOX/KELCH-REPEAT PROTEIN 67 460 - -
Aed6g1233 460 Gene3D - 68 113 - -
Aed6g1233 460 SUPERFAMILY Galactose oxidase, central domain 137 435 IPR011043 -
Aed6g1233 460 Pfam F-box domain 74 114 IPR001810 GO:0005515
Aed6g1233 460 ProSiteProfiles F-box domain profile. 71 116 IPR001810 GO:0005515
Aed6g1233 460 PANTHER F-BOX PROTEIN FAMILY, ATFBX13-LIKE PROTEIN 67 460 - -
Aed6g1233 460 SUPERFAMILY F-box domain 72 129 IPR036047 GO:0005515
Aed6g1233 460 SMART fbox_2 77 117 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1233 Aed-Chr6 17100543 17103416 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1233 - - gmx:100801096 742.651