Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1222 ATGAGCTTATCCAAGAACATATCCCAAACAGACGTGAACCTGAGCTCCTCAAACAAAGCAACCTACTTGAATCCAAATGCAGCTGAGTTTGTTCCATTTGCCCTCAGATCATCGCCATCTGGAAGCACCAGCTCAGTAGATGCAACAGCGAGGTTTACTACTGCTGGATCTCTTGGGAAAGCAGTCTTAGATCAATCAGAATCGTCCATTTCAAATAATTCCGACGATGAGGCTCACCAGTACTGGTGTTGTCAGCTTCCTGATGATATCACCCCTGACTTCAAGGTCATGGGAGAGGACGAATCCCAAGGTCTTAACAACCTCTCTTTAGCAGGCTTATCCATAAATGATGATAATGAATCCTCAATGTTTCCTTCTTCCAAGGGAAGTAGATATATACTAAATGAGCAGCAGGAACTGTCTCAACAGCACCTTAATGGCAATACTTTTGCTGATAAATTAAGGTTTTCCAATTCAACCTACAGGGAGGAGCCATCTTCAGCAAGCATTTTGAACTCATCAGCAAAGCCTTGGGATAGGCAAATTAGGAATACTGATTTGCATGTTAGCAGTGGTCAAGAGGCACTTGTTTATGATGACAACTCTGGACATGGATTCTTAAATGATGTTTTCTCTGGGAATTCTCTTGTGAATGATACTGAATTGAACCCTTTGGAGTTTTTAGCTTCTCTATTCCCTGGTTTTGCTTCAGAAAGCCTTGCTGAAGTTTTTGTTGCCAATGGATGCGATTTACATCTGACCATTGAGATGCTCACTCAGTTAGAGATTCAAGTTGATAGTAGCTTCAATCAGAATCAGAATCCGAGTCCAAAGACTTTGTCATCTCCCAATCTGAGTGCAATGGACTTTCCAGCTCTTACTTCATCAAATGGGCAGAATACTTCAAAATATGCTGCAGATAATGTTCAACAAAGTGGCAATCCATACATATCATCTGATAAAGACATGCTCATGTTCAAATCTGGCTCTTCTATTCCATCTAGAGGTGCTGTTGACTTTGCTTCAGCTGTCAGGAAATTGGCCTCTCAGGATTCTGGTATATGGAAGTATGATAAAAATGGTTCTGGTGATGCTTCCACTGGCTCTAGTCGGAGTTTAAATGCTCTGGCTAGTGCCTACAATGGTGGACAGGGGAGAGTCAACTATGGTGATAGATTGCAGAATCGTGGTTCTGCTCGGGCAACTCCTGTTTGGCTTGAAACTGGTGACGCAGTTGCAAATATGTATTCTGAGCTGCGGGAGGAGGCTCGTGATCATGCACGCTTGCGTAATGCATATTTTGAGCAGGCACGACAAGCCTACCTTGTTGGCAACAAGGCCCTTGCTAAGGAGCTAAGTGTTAAGGGGCAACTGCACAACATGCATATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGCCAGAGGAATCCTGTTGCTCCAGAGATGCAGGGTAATGGAAGAGGACACCAAAGAATGATAGACCTACACGGTTTGCACGTAAGTGAAGCAATTCACGTGCTGAAACACGAACTGAGTGTGCTAAGAAGCACGGCCAGAGCCGCTGAGCAGCGTCTGCAAGTTTACATCTGTGTTGGCACCGGCCACCATACTCGGGGATCCCGCACGCCTGCAAGACTCCCGATAGCTGTACAGCGTTATCTACTCGAGGAAGAAGGCCTCGATTTCACCGAACCGCAGCCAGGCCTGCTTCGTGTTGTGATATATTGA 1737 0.4485 MSLSKNISQTDVNLSSSNKATYLNPNAAEFVPFALRSSPSGSTSSVDATARFTTAGSLGKAVLDQSESSISNNSDDEAHQYWCCQLPDDITPDFKVMGEDESQGLNNLSLAGLSINDDNESSMFPSSKGSRYILNEQQELSQQHLNGNTFADKLRFSNSTYREEPSSASILNSSAKPWDRQIRNTDLHVSSGQEALVYDDNSGHGFLNDVFSGNSLVNDTELNPLEFLASLFPGFASESLAEVFVANGCDLHLTIEMLTQLEIQVDSSFNQNQNPSPKTLSSPNLSAMDFPALTSSNGQNTSKYAADNVQQSGNPYISSDKDMLMFKSGSSIPSRGAVDFASAVRKLASQDSGIWKYDKNGSGDASTGSSRSLNALASAYNGGQGRVNYGDRLQNRGSARATPVWLETGDAVANMYSELREEARDHARLRNAYFEQARQAYLVGNKALAKELSVKGQLHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGHQRMIDLHGLHVSEAIHVLKHELSVLRSTARAAEQRLQVYICVGTGHHTRGSRTPARLPIAVQRYLLEEEGLDFTEPQPGLLRVVIY 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1222 578 ProSiteProfiles Smr domain profile. 496 578 IPR002625 -
Aed6g1222 578 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 578 - -
Aed6g1222 578 SMART SMR_2 493 578 IPR002625 -
Aed6g1222 578 SMART DUF1771_2 415 480 IPR013899 -
Aed6g1222 578 Pfam Smr domain 496 564 IPR002625 -
Aed6g1222 578 Gene3D - 463 577 IPR036063 -
Aed6g1222 578 SUPERFAMILY SMR domain-like 494 576 IPR036063 -
Aed6g1222 578 CDD CUE_CID7_like 222 264 IPR041806 -
Aed6g1222 578 Pfam Domain of unknown function (DUF1771) 416 479 IPR013899 -
Aed6g1222 578 Coils Coil 507 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1222 Aed-Chr6 16966073 16972353 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1222 - - gmx:100796128 1059.28