Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1201 ATGGCCTTCCAAACACTCATCATCACACCCCTTTTGATTCTATTCATCATGAGTATGCATTCTTCTCATGCTAGTGTTGTTGAGTCTTCTAATTGGAAATATGCACCCGAAATTGGAAGTGTTAGGGCTGCGTATTGGCCTGCGGGTGATGACCTTTCACCTTCTTCCATTGACACAAAATACTTCACTCACATCTACTATGCGTTTATCCAACAAGACCCTCAACTCTTTCATCTTAGTGTCACTGAATTTCAGAAGAAATGGATGCCACAATTCATCAACGGGCTCCGCCACCGGAACCCGCCGGTGAAAACTCTCTTGTCAATTGGTGGAGGTAGCAGCAACGCAACCGCGTTCTCCCTCATGGCCAGCAACAAACACACCCGAGAAGTGTTCATCAACTCCACCATCCACGTGGCGCGCCAATACGGGTTCAACGGTCTTGATTTGGATTGGGAGTTCCCAAAAGACGAAGCTGACATGTCCAACCTCAGTATCTTGTTTCGTGAGTGGCACCAAGCTTTGGTGGCAGAAGCAAAAGTTAGTAGAAAATCGCGTTTGCTTTTGACAGCTGCGGTTTACTACGCTTCCACCATCAAGCTTATCGGCAAAGGGCCGAGGTCGTATCCGGCCCAAGCCATTCAGAACTATCTAGATTGGGCCAGCCCAATGTGTTTTGATTACCATGGGACCTGGGCCAATTTCACGGGCTTTAATGCTGCATTGTATGATCCAAAATCCAACATAAGTACCCACTACGGGATCGGGTCTTGGATCAAATCGGGTGTGTCTGCCCAAAAATTGGTTATGGGTTTACCGTTATACGGGCGGGCATGGGCGCTCCAAGACCCGAATGTTCACAGAGTTGGGGCAAAAGCTGTTGGGAAGGCCACTGATACGGATGGTACTTTGGACTATGATGAAATTTTGGTGTTTAACAAAGAGAATGGTGCCACTGTTGTGTATGATGATGAAGCTGTGGCTTTCTACTCTTATGCGGGTACAACTTGGATCGGGTATGATGATGGGCCTTCCATAAAGAAGAAGGTCAAGTTTGCTAAGATTACGGGCTTGAAGGGCTATTTCTTTTGGGCCGTTGGGAAGGATAAGGATTGGACCATCTCAAGACAAGCTTTGTGCATCGTGCATCTTCAAATGCATGGGGACACTGATGGCCACACTGAGTTCACTTTTATATATTTTGTTGTGGTTCAACTTGCTAGGATTTTACATAAGTCAGATTTTCATGTCATCCTCAAACCTTAA 1266 0.4629 MAFQTLIITPLLILFIMSMHSSHASVVESSNWKYAPEIGSVRAAYWPAGDDLSPSSIDTKYFTHIYYAFIQQDPQLFHLSVTEFQKKWMPQFINGLRHRNPPVKTLLSIGGGSSNATAFSLMASNKHTREVFINSTIHVARQYGFNGLDLDWEFPKDEADMSNLSILFREWHQALVAEAKVSRKSRLLLTAAVYYASTIKLIGKGPRSYPAQAIQNYLDWASPMCFDYHGTWANFTGFNAALYDPKSNISTHYGIGSWIKSGVSAQKLVMGLPLYGRAWALQDPNVHRVGAKAVGKATDTDGTLDYDEILVFNKENGATVVYDDEAVAFYSYAGTTWIGYDDGPSIKKKVKFAKITGLKGYFFWAVGKDKDWTISRQALCIVHLQMHGDTDGHTEFTFIYFVVVQLARILHKSDFHVILKP 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1201 421 Gene3D Glycosidases 55 370 - -
Aed6g1201 421 SUPERFAMILY (Trans)glycosidases 44 371 IPR017853 -
Aed6g1201 421 Pfam Glycosyl hydrolases family 18 44 369 IPR001223 GO:0005975
Aed6g1201 421 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Aed6g1201 421 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 40 385 IPR001223 GO:0005975
Aed6g1201 421 PANTHER CLASS V CHITINASE CHIT5A 28 379 - -
Aed6g1201 421 Gene3D - 274 340 IPR029070 -
Aed6g1201 421 SMART 2g34 40 369 IPR011583 GO:0008061
Aed6g1201 421 CDD GH18_plant_chitinase_class_V 41 375 - -
Aed6g1201 421 PANTHER CHITINASE 28 379 - -
Aed6g1201 421 SUPERFAMILY Chitinase insertion domain 275 340 IPR029070 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1201 1 378 Glycoside Hydrolase AT4G19810 42.105 9.59e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1201 K01183 - gmx:100787511 678.707