Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1188 ATGGCTTCTTCGCTTCTCTCCGCAGCTTCGCACTCTGTCACTCCCTCTTCTTCTTCTTCTTCTCTGTCCAATCACAAGGGAAAGCCCAAGATTGGAGGCAGCAACACTTTGAGATTTAACAAAGGACCCAACAACTCCTTCTCTAATCGAAGGTCTAGTGGTCGGATCTCTATGGCTGTTGCGGTTAATGTTTCTCGGTTTGAAGGCATACCTATGGCTCCTCCTGATCCTATTCTCGGGGTTTCCGAGGCATTTAAGGCGGACAATAGTGATGTCAAGCTCAATCTTGGAGTTGGGGCATACAGAACGGAAGACCTACAGCCATATGTGCTTGATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGAGGGGATAACAAAGAGTATCTCCCAATTGAGGGCTTGGCTGCATTTAACAAGGCAACTGCAGAGTTGTTACTCGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAGGGTCTTTCTGGAACTGGTTCTCTGCGGCTAGGTGCAGCTCTGATTGAAAGATATTTTCCTGGGGCAAAAGTTTTAATATCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGTGTCCCATGGTCTGAGTACCGATATTACGATCCCAAGACAGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCAGCTCCAGAAGGAACTTTTGTGTTACTTCATGGATGTGCTCATAACCCTACTGGTATTGATCCAACACCAGAGCAGTGGGAAAAAATAGCTGATCTAATTCAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGGTTTGCTAGTGGAAGCCTCGATGAAGATGCATCTTCTGTGAGACAATTTGTGGCACGTGGCATGGAGGTTCTTGTAGCCCAGTCTTACAGTAAAAATCTTGGTCTGTATGCTGAAAGGATTGGAGCAATCAATGTGATTTCATCATCACCAGAATCTGCAGTAAGGGTAAAGAGCCAGTTGAAAAGGATTGCCCGACCAATGTACTCTAATCCGCCAGTACACGGGGCTAGGATTGTTGCCGATGTTGTTGGAAATCCAGCTCTATTTAATGAATGGAAAGCAGAGATGGAAATGATGGCTGGAAGGATAAAGAATGTTAGACAGCAGCTCTATGATAGTATTACTTCAAAAGACAAGAGTGGAAAGGATTGGTCATTCATACTTAAGCAGATTGGCATGTTCTCATTCACTGGCTTAAACAAGAGCCAGACTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCTGGATTGTCGTTGGCTAAATGTGAATACCTTGCAGATGCTATCATTGATTCATATCATAATGTCAGCTGA 1404 0.4395 MASSLLSAASHSVTPSSSSSSLSNHKGKPKIGGSNTLRFNKGPNNSFSNRRSSGRISMAVAVNVSRFEGIPMAPPDPILGVSEAFKADNSDVKLNLGVGAYRTEDLQPYVLDVVKKAENLMLERGDNKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFPGAKVLISAPTWGNHKNIFNDASVPWSEYRYYDPKTVGLDFEGMIEDIKSAPEGTFVLLHGCAHNPTGIDPTPEQWEKIADLIQEKNHIPFFDVAYQGFASGSLDEDASSVRQFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPESAVRVKSQLKRIARPMYSNPPVHGARIVADVVGNPALFNEWKAEMEMMAGRIKNVRQQLYDSITSKDKSGKDWSFILKQIGMFSFTGLNKSQTDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1188 467 PRINTS Aspartate aminotransferase signature 240 259 IPR000796 GO:0006520|GO:0008483
Aed6g1188 467 PRINTS Aspartate aminotransferase signature 271 283 IPR000796 GO:0006520|GO:0008483
Aed6g1188 467 PRINTS Aspartate aminotransferase signature 339 364 IPR000796 GO:0006520|GO:0008483
Aed6g1188 467 PRINTS Aspartate aminotransferase signature 408 426 IPR000796 GO:0006520|GO:0008483
Aed6g1188 467 MobiDBLite consensus disorder prediction 1 30 - -
Aed6g1188 467 MobiDBLite consensus disorder prediction 1 52 - -
Aed6g1188 467 Gene3D - 125 366 IPR015421 GO:0003824
Aed6g1188 467 MobiDBLite consensus disorder prediction 37 52 - -
Aed6g1188 467 PANTHER ASPARTATE AMINOTRANSFERASE, CYTOPLASMIC 16 465 - -
Aed6g1188 467 PANTHER ASPARTATE AMINOTRANSFERASE 16 465 IPR000796 GO:0006520|GO:0008483
Aed6g1188 467 Pfam Aminotransferase class I and II 93 459 IPR004839 GO:0009058|GO:0030170
Aed6g1188 467 Gene3D Aspartate Aminotransferase, domain 1 70 459 IPR015422 GO:0003824
Aed6g1188 467 SUPERFAMILY PLP-dependent transferases 65 461 IPR015424 -
Aed6g1188 467 CDD AAT_like 94 459 - -
Aed6g1188 467 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 309 322 IPR004838 GO:0003824|GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1188 Aed-Chr6 16659145 16663633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1188 K00811 - gmx:547792 844.728