Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1168 ATGTCTCCCCTCAACAAGGACCTCACCCTCTTGGTTTTGCAATACTTCAATGAGGAAAATTTGAAGGAAGCAGCACGCACACTTGGACATGAGAGTGGCTTATACTTTGACCTAAAATATTTTGAGGACACTGTGCTTGAGGGAAAGTGGGATGAGGCTGAGAACTATCTTTTAGGGTTCACGAAGGTTATGGATAATAGTTTCTCAATTAAAATATTCTTTGAATTGAGGAAGCAAAAATATTTCGAGGCTTTGGAAGTTAATGATCATCACAAGGCCTTAGAAATCCTTTTGAAGGATCTAAAAGTCTTTAACAAGGGAAACGAAAGTTTGTTCAAAGACCTTAGTTACATGTTGATGGTTGATAACATAAGGGACGTTAAACCAATGTATCAAGATGTAAATTCTGCGAGGAAGAATTTGATACTTGAGATTAAGGAAATTATTATTCAACATCCACTTTTAGGCGAAAAGCTCAAATTTCCGATTATTCATAGTCAGAGGCTACACCATATTCTCAATCAAAGCTTAAAATTCCAGCGGCTTCAAAATCCTAATCAAGAACCAAACCTTTCAATGGATTACAGTAATTCCAAACCATCTACTTCTGCTCCAAGAAATTCAGGAAAAAATATGGATTGGAAACCTTCAATGGATGCAAGGCCAAATATCGATTTAGATGAGAGAGGAAGCAATTTAATTTTGGGGAATGCAAAACCTTGTTCAATTGAAGAATCCCATGACAGTTCAAAGAATATGTTTGAGATTCGTACACCATCTCAATGCCGGTTCTCAAAGCTTCCTATGCATCCCGAAGTAAAAAAGATATTAAGACTGGCATACAACAACGCGGGAGATTCCATTTTGGCATTGGCATCGAATGGTATTCATCTAGTTTGGCGTTGGCAATGTAATGTTTCTAACTCAGATGGCAAGGCTAGTGCACAAGTTTGCCCTATACTGTGGCAACCAAAGGATGTTCCGCAATTTATGATCAATGATCTTTCAAATATCAAAGGTGAAAATCCAGTTTCCTGTTTTGCATTATCAAAAATGGATGGATATGTCATTTCAACATCAGGGGGAGTGATCTCCTTGTTCAACATGGTGACATTTAAGACTCTGGCAACTCTCACGTCTCTACCACCTATGGTAACATCTATTTCCTATTACCCTAAAGATAACAATATATTTGGTATTGGCTTTGATGACTCCACTATACTTATATACCATGCTCGTCGTGATGAGGTTCTATTCAAGCTTGAAGGTCACTCTACAAGAGTTACTGCTCTAGCCTTCTCAAATAGTTTGAACATTCTTGTATCTGGTGATGCAAATGCTCAGATTATTCTATGGAATACAAATGGGTGGAAAAAGCTTAAAGAAAAGCACTTGCAAATTCATGGAAACAGGGTGCCAGTACCTGAAACTCAAATTCAATTTCACCCTAATCAACTACATTTCCTTATTGTACATAGTAGCCATCTTGCAATTTATAAAACAATAGAACTCAGATGTGTCAACCAGTGGGTTCAAGAAGTTCCAGTGCTTATCTCTCAAGCAACATTCTCATCTGATGGTCACACTGTGTATTCCATTTTTGTTGATGGGACTGTGGCAATATTTGGTACTTCAAATTTTGAAATTCGTTGTAGGGTCTATCCATCTTGTTATCTCCCTTCAATTTCAAGTTTGGGAGTTTATCCAATTACTATAGCTGCACATCCACAGAAATCAACCCAATTTGCAATAGGGCTCTCAGATGGAAGTGTTTATGTGTTTGAGCCTAGGAGTCAAGGGGGTGATTGGATAAAAAATCAATAA 1824 0.3761 MSPLNKDLTLLVLQYFNEENLKEAARTLGHESGLYFDLKYFEDTVLEGKWDEAENYLLGFTKVMDNSFSIKIFFELRKQKYFEALEVNDHHKALEILLKDLKVFNKGNESLFKDLSYMLMVDNIRDVKPMYQDVNSARKNLILEIKEIIIQHPLLGEKLKFPIIHSQRLHHILNQSLKFQRLQNPNQEPNLSMDYSNSKPSTSAPRNSGKNMDWKPSMDARPNIDLDERGSNLILGNAKPCSIEESHDSSKNMFEIRTPSQCRFSKLPMHPEVKKILRLAYNNAGDSILALASNGIHLVWRWQCNVSNSDGKASAQVCPILWQPKDVPQFMINDLSNIKGENPVSCFALSKMDGYVISTSGGVISLFNMVTFKTLATLTSLPPMVTSISYYPKDNNIFGIGFDDSTILIYHARRDEVLFKLEGHSTRVTALAFSNSLNILVSGDANAQIILWNTNGWKKLKEKHLQIHGNRVPVPETQIQFHPNQLHFLIVHSSHLAIYKTIELRCVNQWVQEVPVLISQATFSSDGHTVYSIFVDGTVAIFGTSNFEIRCRVYPSCYLPSISSLGVYPITIAAHPQKSTQFAIGLSDGSVYVFEPRSQGGDWIKNQ 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1168 607 Gene3D - 274 603 IPR015943 GO:0005515
Aed6g1168 607 SMART Lish 4 36 IPR006594 GO:0005515
Aed6g1168 607 SMART ctlh 34 92 IPR006595 -
Aed6g1168 607 ProSiteProfiles Trp-Asp (WD) repeats profile. 421 462 IPR001680 GO:0005515
Aed6g1168 607 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 421 453 - -
Aed6g1168 607 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 35 92 IPR006595 -
Aed6g1168 607 SMART WD40_4 371 411 IPR001680 GO:0005515
Aed6g1168 607 SMART WD40_4 561 595 IPR001680 GO:0005515
Aed6g1168 607 SMART WD40_4 331 368 IPR001680 GO:0005515
Aed6g1168 607 SMART WD40_4 414 453 IPR001680 GO:0005515
Aed6g1168 607 SMART WD40_4 503 543 IPR001680 GO:0005515
Aed6g1168 607 SUPERFAMILY WD40 repeat-like 340 598 IPR036322 GO:0005515
Aed6g1168 607 MobiDBLite consensus disorder prediction 185 210 - -
Aed6g1168 607 MobiDBLite consensus disorder prediction 185 217 - -
Aed6g1168 607 PANTHER TOPLESS-LIKE PROTEIN 1 606 - -
Aed6g1168 607 PANTHER TOPLESS-RELATED PROTEIN 1-RELATED 1 606 IPR027728 GO:0006355
Aed6g1168 607 Pfam WD domain, G-beta repeat 418 453 IPR001680 GO:0005515
Aed6g1168 607 ProSiteProfiles LIS1 homology (LisH) motif profile. 4 36 IPR006594 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1168 Aed-Chr6 16390449 16395910 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1168 - - cam:101499588 613.224