Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1139 ATGAGAAGAATCTCGAATCTTCTCTCTAAGTCGAAACAACTCGCTGCATTCGCAAGCCCGGAAACCAGATTTCGCGTCAATGCGCTTCGCTCTTACTGCGATCAAACGCACATTCGCCGTCAGAACCGTAGAGGGCCGCTTGTGCAGTACAGAAGTCTAGTTGATCAAGGGAAGTTACGGCACGATCCATTCCAAGAGAGTGTTGCTTTGGAGCTTGAGAATTTGCTTGCAAGGTTGGAGCAGTATGAGAAAGATATGGAAGAGTATCATGTGAATCTAGCTAATTGGGAGAAGCAGCGGGAGGATGAGCGGCGGAGGCTTCTCATGGAGGAAGTTGAGCTGCACCAGAAGGACGAGGACTGGTGGAAGCGGTTGAATAATAAGCTTACCAAAAGATGGGAATCCCGGAAAAGACCAAAAAATATGGAGCCAGGGGTAGGGAAATGGGTGTCATATCTCAAACGTGAGAAGAAGTTGGATTCATTAGTTGGTCGCCGTCCAACTGCTCCTCCAGCTCCTAAAGGGCTTTACATATATGGCAGTGTCGGCAGTGGGAAGACAATGTTGATGGACATGTTTTATAGCGCCACCGAAGGAATTGTCAAACATCGAAGAAGGTATCACTTTCATGAGGCCATGCTTAGAATTAATGAACATATGCACAAGATATGGAAGAACCAAATAGAAGAGAAGCCTTTGCAATCAACCATTTCTGGTTGGATTATGAATCTTCCATTTGACACAAAAGCTAAGGAGTGGTTGTCTGCTGAAGAAAGATACAAGCAAGAGGTACAGATGAAAAACATTCTTCCTGCTGTAGCAGATAAGTTTTTCCTGGATGAAGAAGAGAATGAAAATGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACTGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGTAGTGGAACTATAATTGTGGCTACCAGTAATCGAGCACCAAAGGACTTAAATGAGGCTGGTATGCAAAAAGAAATATTCCAGAAACTTGTCTCCAAATTGGAAAAACATTGTGAGAATGTATTGATAGGGAGCGAAATTGACTACCGACGTTTTATAGCACAAAAATCAGAAAACCAGGTGCAGTATTTCTGGCCTATTGAAAAGGAAGCGATCAATGAATTTGAGAAAAAGTGGCATGATGTAACAGGCAGATTAGGAGGAAGAATAATCTCCAACACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCTGAAAGCTTTCATGGAGTTGCACGCTTCACATTTGAGTATCTCTGCGGTCATCCGTTGGGTGCAGCAGACTATATTGCAGTAGCTGAAAACTTTCACACTGTTTTCATATCTGACATTCCAGCAATGAGTATGCGTAACCGTGACAAGGCACGGAGATTTATCACCCTTATTGACGAGTTATACAATCATCATTGCTGCCTGTGTTGTTTGGCATCCTCTTCAATTGATGAATTATTTCAAGGAACCGAAGAGGGCACACTTTTTGACTTGGAAAGTTTCCAGTTTGAAACAGAGACTGAAGGTGGCAAACTTCGCTGCAATGTCTTGGCAGAAGGCAGGGTGAGCTCAGGAGGTGCCCCTTCTGGTATCACATCCATATTATCTGGTCAAGAAGAGATGTTTGCCTTTCAAAGAGCTGTCTCACGCCTGATTGAAATGCAAACGCCATTATACTTGGATGGAGTCAGTAATTTCCACCCTTATTTTCAGAGGCATCATAAACAGTTACAACAATTGTGA 1782 0.4304 MRRISNLLSKSKQLAAFASPETRFRVNALRSYCDQTHIRRQNRRGPLVQYRSLVDQGKLRHDPFQESVALELENLLARLEQYEKDMEEYHVNLANWEKQREDERRRLLMEEVELHQKDEDWWKRLNNKLTKRWESRKRPKNMEPGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGSVGSGKTMLMDMFYSATEGIVKHRRRYHFHEAMLRINEHMHKIWKNQIEEKPLQSTISGWIMNLPFDTKAKEWLSAEERYKQEVQMKNILPAVADKFFLDEEENENGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPKDLNEAGMQKEIFQKLVSKLEKHCENVLIGSEIDYRRFIAQKSENQVQYFWPIEKEAINEFEKKWHDVTGRLGGRIISNTISVMFGRTLEVPESFHGVARFTFEYLCGHPLGAADYIAVAENFHTVFISDIPAMSMRNRDKARRFITLIDELYNHHCCLCCLASSSIDELFQGTEEGTLFDLESFQFETETEGGKLRCNVLAEGRVSSGGAPSGITSILSGQEEMFAFQRAVSRLIEMQTPLYLDGVSNFHPYFQRHHKQLQQL 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1139 593 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 355 IPR027417 -
Aed6g1139 593 Gene3D - 163 366 IPR027417 -
Aed6g1139 593 PANTHER AFG1-LIKE ATPASE FAMILY PROTEIN 37 592 - -
Aed6g1139 593 Coils Coil 65 113 - -
Aed6g1139 593 Pfam AFG1-like ATPase 157 504 IPR005654 GO:0005524|GO:0016887
Aed6g1139 593 PANTHER ATPASE N2B 37 592 IPR005654 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1139 Aed-Chr6 16061987 16069227 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1139 - - mtr:MTR_1g012370 937.176