Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1125 ATGGGTTGGAAAGCAGCCGAGAAACTCATTAGGCACTGGAAAGTTCTCAGAGGGGATAATGTTGTTATGATAACAAGAGGCAAAGATAAGGGAGAGACTGGGACTATTAAGCGCGTCATTCGCTCTCAGAATCGTGTCATCGTTGAGGGTAAAAATCTGGTGAAGAAACATATTAAGCAAGGGCAAGGTCATGAAGGGGGCATCTTTTCAGTTGAAGCCCCACTCCATGCCTCCAATGTGCAAGTTCTTGACCCAGTGACAGGGAAGCCTTGCAAGGTTGGAGTTAAATATCTTGAAGATGGTACTAAAGTCAGAGTATCCAGAGGAATAGGAGCATCTGGTTCCATAATCCCTCGGCCTGAGATCTTAATGATAAGAGTTACCCCACGACCTACTGTCCTTGGTCCCAAAGATACTCCCATGGATCTTGTGTTAGAGAAGACTTACGATGCTAAAGCAGGAAGGGGCATGCCTGAGCTTTAA 483 0.4576 MGWKAAEKLIRHWKVLRGDNVVMITRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFSVEAPLHASNVQVLDPVTGKPCKVGVKYLEDGTKVRVSRGIGASGSIIPRPEILMIRVTPRPTVLGPKDTPMDLVLEKTYDAKAGRGMPEL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1125 160 TIGRFAM rplX_bact: ribosomal protein uL24 14 108 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aed6g1125 160 SUPERFAMILY Translation proteins SH3-like domain 10 109 IPR008991 -
Aed6g1125 160 PANTHER 39S RIBOSOMAL PROTEIN L24, MITOCHONDRIAL 1 152 - -
Aed6g1125 160 CDD KOW_RPL26 18 82 IPR041988 GO:0003723
Aed6g1125 160 Gene3D - 4 112 IPR014722 -
Aed6g1125 160 Pfam KOW motif 19 49 IPR005824 -
Aed6g1125 160 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 52 109 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aed6g1125 160 Hamap 50S ribosomal protein L24 [rplX]. 13 108 IPR003256 GO:0003735|GO:0005840|GO:0006412
Aed6g1125 160 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 1 152 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1125 Aed-Chr6 15847460 15851835 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1125 K02895 - gmx:100499816 302.753