Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1115 ATGAAGGCTCTGGCAGAGAAGCTAACACACATGATATTCAACTTATTGGGGAACAACATTTCAGAGGAACATAAGAAATGGATGAATGGTTCAAGCAACTTATGCGAAGCAGTTCAGCTAAACTTCTACCCATGCTGCCCCGAGCCACACCGAGCCATGGGGCTAGCCCCTCACACCGACACGTCGCTCCTCACAATCCTCCACCAGAGCCAAACCACCGGCCTCCAAATCTTCAAGGAAGGAAAGGGGTGGGTCCACGTCCACCCTCACCCTAACCCTAGCACCCTTGTGGTTCACACCGGTGACATTCTTCATATTTTGTCTAATTCTAGGTTCCGGTGTGCGCTCCACCGTGTCGTCGCGAATGGCTCGAGAGAGAGATACTCTGTGGCTTATTTCTATGGACCACCTTTGGACCATGTTGTTTCTCCTTTGGTTGGTGGTGGTTCCTTGTTGTTGCCTAGGTTTCGTTCCTTGAGTGTTAAGGAGTATATTGGCATCAAGGCTAAGAACCTTCGGGGTGCTTTAAATATGACTTTAAATCCAGCTTACCCAACCCTTGTATTTACTTGTGTACAATTTCGTAGTTGTGATAGCTTCATCTTGATAGGTGGCTCCATTTTTGTTTGA 630 0.4762 MKALAEKLTHMIFNLLGNNISEEHKKWMNGSSNLCEAVQLNFYPCCPEPHRAMGLAPHTDTSLLTILHQSQTTGLQIFKEGKGWVHVHPHPNPSTLVVHTGDILHILSNSRFRCALHRVVANGSRERYSVAYFYGPPLDHVVSPLVGGGSLLLPRFRSLSVKEYIGIKAKNLRGALNMTLNPAYPTLVFTCVQFRSCDSFILIGGSIFV 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1115 209 Gene3D - 1 172 IPR027443 -
Aed6g1115 209 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 1 175 - -
Aed6g1115 209 Pfam 2OG-Fe(II) oxygenase superfamily 37 136 IPR044861 -
Aed6g1115 209 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 175 - -
Aed6g1115 209 SUPERFAMILY Clavaminate synthase-like 1 172 - -
Aed6g1115 209 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 31 136 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1115 Aed-Chr6 15706043 15707690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1115 42 179 Glycosyltransferase AT5G59530 35.417 1.18e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1115 K04124 - gmx:100808546 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed7g2429 7 26162291 26163912 Aed6g1115 6 15706043 15707690 PCT