Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1109 ATGCTCAAGCAAATCCTCAGCAAGCTTCCTCGGAAGTCGTTGAAACCCGACTCGGACGAGTCGACTCGGGGCGGCGACTCGGCATGTTCCGCAGATTCGCCACGTGCTGCCGGCGGGAGAGGCCACAAGCCACCCGGCGGCGGGAGTTCTTCCGCCGCCAAGCGAGCTTCGTCGTCGGCGGTGTTCCCGGCGAGCGTGGTGTCCGGAATTGAACCCTTGGTGCCGTTTAAGGATGTTCCTAATGCTGAAAAGATGAACCTTTTTGTGAGCAAATTGAGCCTTTGTTGCGTCACATTTGATTTCACTGACCCTGGTAAGAGCATTGCAGATAAAGATGTGAAAAGGAAGACTTTGGTTGAGCTTGTTGATTTTGTGTCATGTGGGTCAATGAGGTTTAGTGAGCCTGCTATTCTTGCTATGTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTCCCTCCTAATTATAGGGCAAGTGGTGGTGGTGAGAATGATGATGATGAGCCTATGTTTGATCCATCCTGGCCACATTTGCAGCTTGTGTATGAATTGCTGCTTAAGTTTATCTCCTCTTCGTGCCTCGACGCAAAGGCGGCAAAGAAGTACATCGATCACTCGTTTATCGCCAGACTGCTCGAGTTGTTTGATTCAGAGGATCCTCGAGAAAGGGATTGCTTGAAGACGATTCTGCATCGGATTTATGGGAAGTTCATGGTGCATAGGCCCTATATTCGGAAATCTATGAACAATATATTCTATCGGTTCGTGATCGAGACTGAGAAGCACAATGGGATCGGTGAGTTGTTGGAAATTTTCGGGAGCGTGATTACCGGGTTTGCTTTGCCCTTGAAAGAGGAACACAAAATCTTCATGTGGAGAGTTTTGATACCCTTGCACAAGCCGAAATCTATGGGGGTCTACTTTCAGCAATTGTCCTACTGTGTTATGCAGTTTATAGAGAAGGAGCCAAAGTTGGCAAGCATTGTGATAAGGGGTTTGTTGAAATATTGGCCAGCAACAAATAGCCAGAAAGAGGTGATGTTTCTGGGCGAACTGGAAGAAATTTTGGAAGTGATTAACATGGTAGAGTTCCAGAGGATCATGGTGCCATTGTTTTGGCGGATTGGATGCTGCATTAACAGCTTACACTTTCAGGTATCTGAAAGGGCACTTTTCTTATGGAACAACGACCACATTGTCAACTTGATTGCGCACAACCGACAAGTGATTCTGTCCATCATATTTCCAGCTCTAGATAGAAATATTCAAAGCCATTGGAACCCGGCAGTCGTCAACCTAACTCACAACATCAGAAAGATGTTCTTGGAGATGGACGAGAAGCTCTTCATTTCGTGTCACAATCACTTTAAGGAGGAAGAAGCCATCTTGGTCTCGACAGCGGAGAAGCGGAAGGAGGCGTGGAAACAACTGGAGCATGCAGCAAGTCTCAGGCCAGTAATTGGAAACACTGCAGTTTTAGTTTCCTGA 1488 0.4664 MLKQILSKLPRKSLKPDSDESTRGGDSACSADSPRAAGGRGHKPPGGGSSSAAKRASSSAVFPASVVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKSIADKDVKRKTLVELVDFVSCGSMRFSEPAILAMCRMCAINLFRVFPPNYRASGGGENDDDEPMFDPSWPHLQLVYELLLKFISSSCLDAKAAKKYIDHSFIARLLELFDSEDPRERDCLKTILHRIYGKFMVHRPYIRKSMNNIFYRFVIETEKHNGIGELLEIFGSVITGFALPLKEEHKIFMWRVLIPLHKPKSMGVYFQQLSYCVMQFIEKEPKLASIVIRGLLKYWPATNSQKEVMFLGELEEILEVINMVEFQRIMVPLFWRIGCCINSLHFQVSERALFLWNNDHIVNLIAHNRQVILSIIFPALDRNIQSHWNPAVVNLTHNIRKMFLEMDEKLFISCHNHFKEEEAILVSTAEKRKEAWKQLEHAASLRPVIGNTAVLVS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1109 495 PIRSF PP2A_B56 9 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed6g1109 495 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 495 - -
Aed6g1109 495 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 75 481 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed6g1109 495 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 495 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed6g1109 495 MobiDBLite consensus disorder prediction 1 54 - -
Aed6g1109 495 Gene3D - 80 480 IPR011989 -
Aed6g1109 495 SUPERFAMILY ARM repeat 86 477 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1109 Aed-Chr6 15659203 15663343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1109 K11584 - gmx:100781390 908.672
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1109 6 15659203 15663343 Aed7g2425 7 26133784 26137391 PCT