Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1094 ATGACTTTTGAGGTTGGAAGGAAAATCAGTGATAAAGGCAGGCTTTGCCTGGGAGCAATACTGGAAGGAAGGGATATGAAGCTTAAAAGGTGGCTCTCAAGTGTTTTGTTCCTCATTGTTGCCACAGTGAGCAATGCAGCTGGTGCATTTGTGGGGGTAAACATTGGCACTGATGTCACTGATCTTCCATCTGCTTCAAACATGGTTGCTATCCTAAAAGCACATCAAATCAAACACATTCGTCTGTACAATCCTAACGAGCACATGCTACAAGCCCTTTCAAACACCGGCATTGAAGTGATTGTTGGTGTCACAGATGAAGAGATACGAGGAATTGGAGAATCTGCAACAGCTGCAGCAGCATGGATCAGCAAGAATGTGGCTGCATACATGCCATCCACCAACATCACAGCAATATCAGTTGGCAGTGAGGTCCTCACCTCAGTCCCAAATGTTGCACCCGTTCTTGTCCCTGCCATGAACCATCTCCACAAAGCACTTGTTGCTTCAAACCTTAACTTCCGCGTCAAGGTTTCATCGCCAATGTCGATGGACATCGTCTCTAGGCCTTTTCCTCCTTCCACGGCTGCCTTCAACTCCTCATGGAACTCCACAATCTACCAACTACTTCAGTTTTTGAAGAACACAAACTCCTCTTACATGCTAAATGCTTACCCTTACTATGGATACACCAAAGGAGATGGCATTTTCCCTATTGAATATGCTCTATTCCAACCCCTTTCTCAAGTGAAGCAAATTGTTGACCCTAACACACTCTTCCACTACAATAGCATGTTTGAGGCTATGGTGGATGCTACTTACTATGCCATAGAAGCCTTGAATTTCAATGACATACCTATTGTCGTCACAGAAACCGGTTGGCCGAGTTTTGGTGGAGAAAATGAGCCAGATGCTACTTCAAAGAATGCTGAGACCTACAATAATAACTTGGTTATGAGAGTACTCAATGGTTCAGGTCCACCTAGTCAACCCAAGATAGCAATCAATACCTACCTATATGAACTATTCAATGAAGATAAGAGGAAAGGTCCTATATCAGAAAGGAATTGGGGTGTTTTTTATGCTAATGGAAGTAGTGTTTATTCCTTGAGTTTTAGTGCTTCAAACATGAGTCATGGAAACTCTCTAGGATCATTTTGTGTGGCTAAGGATGATGCAGATAGTGATAAATTGCAAGATGGATTGAGCTGGGCCTGTGGACAAGGCCAAGCTAACTGTGTAGCTATTCAGCCTGGGAGAGCTTGCTTTTCCCCCAATAATGTGAAGAGCCATGCCTCTTATGCTTATAATGATTATTATCAGAAAATGCATAATGCTGGTGGAACATGTGACTTTGATGGTACAGCTGCAACAACTACTGAGGATCCTACATTTGGACTTGGACCTGTAAGTCCAATTGGAGCTAGTTTGAACCTGCAAGTGTCCACACTTCAGTATTTGACATCTTCTATTAGTGTATTTTTTGCTCTGATTTACGTGCCATCTTGTATGGGTCAGATACCAGAGAACAGTACTCAGATCACCTACAATGAAAAATCTACTACTGTAGGTGATTTTAAGGGTGGATGGAATTCTAATTTAACTGCAAAAACAGAGTCATCAGATTCCTCAGAATCACTCCTGTCAGGTTCCCCTGCATTCGTAAGATTCTCTGGAACATCATGTTTTGGTGCAGGCTTAGGTGCAGTTTTTTTATTAGCACCTCGGGCATTCTCATCCCCTTCTTCTGGCTCAGCTGCTTCTATATGTGAATCTCAGTCAAGGAAATAA 1791 0.4271 MTFEVGRKISDKGRLCLGAILEGRDMKLKRWLSSVLFLIVATVSNAAGAFVGVNIGTDVTDLPSASNMVAILKAHQIKHIRLYNPNEHMLQALSNTGIEVIVGVTDEEIRGIGESATAAAAWISKNVAAYMPSTNITAISVGSEVLTSVPNVAPVLVPAMNHLHKALVASNLNFRVKVSSPMSMDIVSRPFPPSTAAFNSSWNSTIYQLLQFLKNTNSSYMLNAYPYYGYTKGDGIFPIEYALFQPLSQVKQIVDPNTLFHYNSMFEAMVDATYYAIEALNFNDIPIVVTETGWPSFGGENEPDATSKNAETYNNNLVMRVLNGSGPPSQPKIAINTYLYELFNEDKRKGPISERNWGVFYANGSSVYSLSFSASNMSHGNSLGSFCVAKDDADSDKLQDGLSWACGQGQANCVAIQPGRACFSPNNVKSHASYAYNDYYQKMHNAGGTCDFDGTAATTTEDPTFGLGPVSPIGASLNLQVSTLQYLTSSISVFFALIYVPSCMGQIPENSTQITYNEKSTTVGDFKGGWNSNLTAKTESSDSSESLLSGSPAFVRFSGTSCFGAGLGAVFLLAPRAFSSPSSGSAASICESQSRK 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1094 596 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 27 479 - -
Aed6g1094 596 SUPERFAMILY (Trans)glycosidases 51 371 IPR017853 -
Aed6g1094 596 Gene3D Glycosidases 50 380 - -
Aed6g1094 596 Gene3D - 381 466 - -
Aed6g1094 596 SMART X8_cls 385 467 IPR012946 -
Aed6g1094 596 Pfam X8 domain 386 456 IPR012946 -
Aed6g1094 596 ProSitePatterns Glycosyl hydrolases family 17 signature. 285 298 IPR000490 GO:0004553|GO:0005975
Aed6g1094 596 Pfam Glycosyl hydrolases family 17 51 372 IPR000490 GO:0004553|GO:0005975
Aed6g1094 596 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 27 479 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1094 Aed-Chr6 15416335 15421653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1094 26 481 Glycoside Hydrolase AT3G13560 63.333 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1094 K19892 - gmx:100786558 870.537