Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1079 ATGGCGATGATGCTTTCCAAGATAACATCCTCACTATCCCCATCCCTATCCCTATCCTCCAAACCCAAACACTTTCGCAACGCCTTTCTTCTTTCTCGTTCCACCGCCACCACCACCAAACATAACCAGAAGAAGAAAAAAGAGAACGCAAAAGCAGCGTTGGCCAAGGAGAAGCGCAGAACCCGCTCCGAAAAACAGTTCAACAGAGACGCCATAATCGAGCGCTGCAACATAAACGACACCGATGACACCGTCACCAAGTCCTCTCACATTCCCGTCATGCTCGGCGAAGTCTTGGACGTGTTCTCCAACGCTTCGTTAGCATCCTTCGTCGATTGCACTCTCGGCGCCGCCGGCCACTCCACCGCCGTGATTAGGGGGCATCCAGAGTTGAAGTATTTCGTGGGGATGGATGTGGACTCTGTCGCACATGACATCGCCCAGCCTCGCCTCGATGCTGTTTTGAATGGTGGTGGTGTCAAAGCCATTACCGTTTTGAGGAATTTTAGAGACGTCAAGTCTGTGCTTAGAGAAATTGACAAGCCACATTCGGGGGTAGACGGCATCTTAATGGATTTGGGAATGTCGTCTATGCAGGTGGACGATCCTGCAAGAGGATTCAGTGTGCTTGGTGATGGACCCCTTGATATGCGGATGAATCCTCAGGCAAGTCTTAAAGCAGAAGACATATTAAATTCCTGGCCAGATTCTGAAGTGGGCCGTATCCTAAGGGATTATGGGGAAGAAAGTCATTGGCGAACTCTGCAAAAGAAAATTGTCAATGCGCGACTACATGGTGGATTTCATTCAACTAGCGACTTGCTAGATCTTATTCGGCGTGTGACTCCTCCAATGAAAGGTGGAAGGCAGGGTTGGATAAAGACTGCAACACGGGTGTTTCAAGCTCTGAGAATTGCCGTTAATGATGAGCTGAAGACGCTCGAGGACTCCCTCTATTCTTGTTTTGATAGCCTTGCACCTGGGGGTAGGCTTGCTGTCATATCTTTTCACAGTCTAGAGGACAGAATTGTGAAGCAGACATTTCTTGATATCATTAAAGAAAGGGAGAGCCTCAACAGTGATTTGAGGAAGACCATTGATGAAATCAAAGAAAAAGAAGCATGGATAAAGCAAGTAATGCATGGATCAAATGGAACAATTCTCACAAAAAGACCAATCACACCATCAGGAGAAGAAGAAAAATTGAACCGTCGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCACTGA 1254 0.4729 MAMMLSKITSSLSPSLSLSSKPKHFRNAFLLSRSTATTTKHNQKKKKENAKAALAKEKRRTRSEKQFNRDAIIERCNINDTDDTVTKSSHIPVMLGEVLDVFSNASLASFVDCTLGAAGHSTAVIRGHPELKYFVGMDVDSVAHDIAQPRLDAVLNGGGVKAITVLRNFRDVKSVLREIDKPHSGVDGILMDLGMSSMQVDDPARGFSVLGDGPLDMRMNPQASLKAEDILNSWPDSEVGRILRDYGEESHWRTLQKKIVNARLHGGFHSTSDLLDLIRRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDSLAPGGRLAVISFHSLEDRIVKQTFLDIIKERESLNSDLRKTIDEIKEKEAWIKQVMHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1079 417 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 90 417 IPR002903 GO:0008168
Aed6g1079 417 Gene3D Putative methyltransferase TM0872, insert domain 203 310 IPR023397 GO:0008168
Aed6g1079 417 MobiDBLite consensus disorder prediction 386 407 - -
Aed6g1079 417 MobiDBLite consensus disorder prediction 36 65 - -
Aed6g1079 417 TIGRFAM TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 87 416 IPR002903 GO:0008168
Aed6g1079 417 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 60 416 IPR002903 GO:0008168
Aed6g1079 417 MobiDBLite consensus disorder prediction 48 65 - -
Aed6g1079 417 Pfam MraW methylase family 88 416 IPR002903 GO:0008168
Aed6g1079 417 SUPERFAMILY Putative methyltransferase TM0872, insert domain 205 308 IPR023397 GO:0008168
Aed6g1079 417 Gene3D Vaccinia Virus protein VP39 90 414 IPR029063 -
Aed6g1079 417 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 416 IPR029063 -
Aed6g1079 417 Coils Coil 352 372 - -
Aed6g1079 417 Coils Coil 40 64 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1079 K03438 - gmx:100787277 656.751