Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1076 ATGGGGGACGAGAAAGGCGAGAAGAAAGAAACTAGTTCCAGTGCGGGAAACGAGAAAAAGAAAGAGAACAAGAACGAGAAGAAGAAGAAGAAGGGGTTTATATCGCGAATTTGGAACGCGATATTCAGGTCGAACCGCGACGATTTCGAGAAGAGGCTTCAGTATATCTCAAAAGAGGAGAACTTGGTTGTCACCAGAATCACCAACAGATCTCGCTCTTCCAGGCGAACCTCTCGCCAGCTTATCTTATTCTCTCTTCTTTTTGAGGTCATTGCTGTATGTTATGCTATTATGACAACAAGATCATTGGACATGAATTGGAAAATGAGGGCGATCCGAGTTCTGCCAATGTTTCTTTTGCCTGCCTTGTCATCTGCTGCATATGCAACATTTGTAAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGTCTTCGAGCTGAAAGAAAGGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTACTCAACAACTCATTCAGAGGTATGATACAGATCCTGCAGCAAAGGCAGCTGCTGCGACTGTTTTAGCATCCAAGTTGGGTGCAGATTCGGGTTTGAAAGTGTATGTGGGGGATGAATCTTTGGGTGCTCCGACAGGGAAGACCAAGGATGTTGAAGATGTGCAGTCTAGTGGGCTTCGAAATCGCAAACAAATGAACTCTAGATCTACTAGTCCAGGGACAACTACACCAAATTATTCCGGTCAACAATTAGTTGGCTCTGGGAAAATAGATCAAACTCAAACTCCTGAGCATAATCAGCTTGTAGTTGTTGAACATTATCCTCAAAGTTCAACAAATGATGGAGGATGGATTGCTCGAATTGCGGCGTTGCTTGTGGGTGAGGATCCAACGCAATCTTATGCGCTTATATGCAGTATCTGCCATATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTATTACTGTCCACACTGTCATGCCCTGAACAAACCAAAGCAATCGGGTGAGCTTATATCTGGTTTAAATTCCCCAAACACCCAGTCTTCTAAAACAGATGATGGCGAAGAAGTTAAAAATGCCAGTGATTCTGCAGCCGAGAGTGTAATCAGAAGCGATAATCCTGTCAATACTAGCCCTGAGATCGAGGAAGTATTGGATGAAGAAGTTAAAGATGCTAGTGATTCTGCAGCTGAGAGTGTAATCGAAAGTGATAATCCCATAAATACAAGCCCTGGGATTGAGGAAGTATCTGAACCAGTGATTTCAGACGAGAAAAGCTAG 1299 0.4296 MGDEKGEKKETSSSAGNEKKKENKNEKKKKKGFISRIWNAIFRSNRDDFEKRLQYISKEENLVVTRITNRSRSSRRTSRQLILFSLLFEVIAVCYAIMTTRSLDMNWKMRAIRVLPMFLLPALSSAAYATFVSFTRMCDRRDQKILESLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLKVYVGDESLGAPTGKTKDVEDVQSSGLRNRKQMNSRSTSPGTTTPNYSGQQLVGSGKIDQTQTPEHNQLVVVEHYPQSSTNDGGWIARIAALLVGEDPTQSYALICSICHMHNGLARKEDFPFITYYCPHCHALNKPKQSGELISGLNSPNTQSSKTDDGEEVKNASDSAAESVIRSDNPVNTSPEIEEVLDEEVKDASDSAAESVIESDNPINTSPGIEEVSEPVISDEKS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1076 432 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 14 393 IPR040115 GO:0071786
Aed6g1076 432 MobiDBLite consensus disorder prediction 342 356 - -
Aed6g1076 432 MobiDBLite consensus disorder prediction 1 30 - -
Aed6g1076 432 MobiDBLite consensus disorder prediction 226 262 - -
Aed6g1076 432 MobiDBLite consensus disorder prediction 213 262 - -
Aed6g1076 432 Coils Coil 143 163 - -
Aed6g1076 432 MobiDBLite consensus disorder prediction 404 418 - -
Aed6g1076 432 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 285 335 IPR019273 -
Aed6g1076 432 MobiDBLite consensus disorder prediction 370 384 - -
Aed6g1076 432 MobiDBLite consensus disorder prediction 342 432 - -
Aed6g1076 432 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 14 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1076 Aed-Chr6 15249236 15254907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1076 K23292 - gmx:100815496 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1076 6 15249236 15254907 Aed7g2397 7 25918427 25923054 PCT