Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1075 ATGGGCACGGCGGCGCCACTGCACCTCTGCGTTAGTTTCAATCCAACCACTTCAAATCCTCCTCAAGGTAGAAAATGCAAGTACGAAGGCCAATCAGTGCGATCGCGTGGACTGCAGCTCATGGTTGATGAGTATGTGGATAAGCTCAGGTACTATTGTAGTGTTGAGGATGTTCAAATACGGCCAAATCCTCGAAATGCACGTGACCAAAGGGCTCAGGTTGATGCTGAAGATGAGGCAATGATGAACCTTATAAGGTCTGATGATTGGGTTGTGGTGTTGGATGAACACGGGCAAGACATAGGATCTGAGCAAATGGCAGAGTTGGTGGGTGATGCAGGAACTACTGGTGCTTCACGATTATCCTTCTGTATTGGTGGGCCCTATGGACATGGAAGAAAAATGAGGGAACGGGCTAACTTATCAATCAAGTTATCTTCACTGGTCTTAAATCATCAAATAGCATTACTCGTGCTTATGGAACAGCTTTACAGGTCGTGGACAATTTTAAAAGGACAAAAGTACCATCACTAG 534 0.4569 MGTAAPLHLCVSFNPTTSNPPQGRKCKYEGQSVRSRGLQLMVDEYVDKLRYYCSVEDVQIRPNPRNARDQRAQVDAEDEAMMNLIRSDDWVVVLDEHGQDIGSEQMAELVGDAGTTGASRLSFCIGGPYGHGRKMRERANLSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQKYHH 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1075 177 Pfam Predicted SPOUT methyltransferase 35 176 IPR003742 GO:0006364|GO:0008168
Aed6g1075 177 SUPERFAMILY alpha/beta knot 35 175 IPR029028 -
Aed6g1075 177 CDD RlmH-like 34 177 IPR003742 GO:0006364|GO:0008168
Aed6g1075 177 PANTHER METHYLTRANSFERASE 20 177 IPR003742 GO:0006364|GO:0008168
Aed6g1075 177 Hamap Ribosomal RNA large subunit methyltransferase H [rlmH]. 26 177 IPR003742 GO:0006364|GO:0008168
Aed6g1075 177 Gene3D - 30 177 IPR029026 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1075 K00783 - gmx:100796609 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1075 6 15243239 15248425 Aed6g1075 6 15243239 15248425 ECH