Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1068 ATGGATTCCATCTACGCGAGCTCGTCGTGCACGGTTCCCCACCTTCTCCGTCGCGAGGCTTTGTTCCTGCCGCCGCGAACCTCGAGGAATTCGGTTCCGCTCCGGCGAGCGAAGCGCGCGCGGGTTTCGAGTTTCGCCGCCGCGACGGGAAGCGGCGTCGCTTCGAAAGGCGCCGTTTCGAGGGCGTTGAGCAACAACAGTAGCTCTGCACTGGAGCAGCTCGACATCGAGCGCGGCGTGTGCATCCCTTTCCGCAAGTACTCGCCCGAGATCGTGAGGAATAAGGTATTAGAATCCAGAGGGTCCACTTTGTCACTTATGTTGCGGGGAGTGGAGATAGTTTGGAGTCTGGGCTTGTACTGGTCTAACTTGGTGTATGATTTCCTGGTTGGAAGGGATGAAGAGGTTGTTCCGTATCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCTTCTTTTATTAAAGCTGGTCAGGTCCTTGCAAATAGGCCAGATATCATTCGAGAAGATTATATGAATGAACTTTGCATTCTTCAAGATGATGTTCCTTCATTTCCCAATGAAATTGCCTTCAAAATCATAGAGGAGGATCTGGGTCAACCCCTTGAAGCTGTTTTCAGCAAAATCTCATCAGAGACAATAGCAGCTGCAAGTTTAGGTCAAGTTTACAGAGCTACTCTACGTGCCACTGGCGAGGATGTTGCTATCAAGGTTCAGAGGCCTGGGATAGAGCCCATTATATATCGAGATCTTTTCCTATTCCGCACTTTGGCTTCATTCTTAAATGGCATTAGTACACAGAAACTGGGATGTAATGCTGAGCTGATTGTTGATGAATTTGGTGAAAAGCTTTTGGAAGAGCTTGATTATACCCTGGAAGCCCGTAATCTGGAAGACTTTCTTGAGAATTTTAAAAATGATCCTACAGTCAAAATTCCTCAGGTTTACAAACAATTTTCTGGTCCACGTGTGCTGGTAATGGAATGGATTGATGGTATCAGGTGCACCAATCCAAAGCAGGCCATCAAAGAAGCCGGTATTGATGTAGGTGGATTTTTAACAATTGGAGTGAGTGCTGCCCTACGACAACTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGGCGAATTGCATATGTGGATTTTGGCAATGTTGCTGTTCTCAGTCAGCAAAATAAACAGATTTTAATTGATGCTGTTGTCCATGCTGTGAATGAGGACTATGCTGAGATGGCTAATGATTTCACCAGATTAGGCTTCCTGACCCCAGGGACTGACGTGACTCCTATAGTTCCTGCTTTGGAAGCAATTTGGCAGAACTCTGCTGGAAAAGGACTGTCAGATTTTAATTTTCGTAGTGTCACTGGAAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATTCCAGAAAGGTTTTCACTTGTAATTCGTTCTTTATTGACACAAGAAGGCATTTGTTTTACCCTGAAACCCGACTTCAAATTTCTTGAGGTTGCCTATCCTTATGTGGCTAAGCGACTGCTGACAGACCCAAATCCAGCTCTACGTGAACGCCTCATACAGGTTCTATTCAAAGATGGTCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCCAAGATGAGCAGCAATCCAGCATTGCAAGTGAAAAACACGCAAAGCCAGAGAGACTTAAAAGTTGAAAGAAAATTGGACCTCACAGACACAATCAAAGATGGAGCTCGCCTTTTCTTGGTTGATGAAGGAATACGTAGACAACTTCTTCTTGCTTTGACTGAAGATTCAAAGCTTCATATTGAAGAGACTTTCCAACAACTGTCAGGGATCTCCTACTTTCATGGAGTGAATCAGTCTTGTCTGACAGATAGCTAA 1932 0.4513 MDSIYASSSCTVPHLLRREALFLPPRTSRNSVPLRRAKRARVSSFAAATGSGVASKGAVSRALSNNSSSALEQLDIERGVCIPFRKYSPEIVRNKVLESRGSTLSLMLRGVEIVWSLGLYWSNLVYDFLVGRDEEVVPYRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMNELCILQDDVPSFPNEIAFKIIEEDLGQPLEAVFSKISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISTQKLGCNAELIVDEFGEKLLEELDYTLEARNLEDFLENFKNDPTVKIPQVYKQFSGPRVLVMEWIDGIRCTNPKQAIKEAGIDVGGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYAEMANDFTRLGFLTPGTDVTPIVPALEAIWQNSAGKGLSDFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLIQVLFKDGLFQWKRLENLIVLAKENVAKMSSNPALQVKNTQSQRDLKVERKLDLTDTIKDGARLFLVDEGIRRQLLLALTEDSKLHIEETFQQLSGISYFHGVNQSCLTDS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1068 643 Gene3D Transferase(Phosphotransferase) domain 1 209 413 - -
Aed6g1068 643 ProSiteProfiles Protein kinase domain profile. 210 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g1068 643 SUPERFAMILY Protein kinase-like (PK-like) 181 420 IPR011009 -
Aed6g1068 643 CDD ABC1_ADCK3-like 180 427 - -
Aed6g1068 643 Pfam ABC1 atypical kinase-like domain 180 425 IPR004147 -
Aed6g1068 643 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 35 624 - -
Aed6g1068 643 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 35 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1068 Aed-Chr6 15123376 15133322 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1068 - - gmx:100790292 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1068 6 15123376 15133322 Aed6g1068 6 15123376 15133322 ECH
Aed10g0590 10 4756590 4772925 Aed6g1068 6 15123376 15133322 PCT