Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1045 ATGTCATCAAAAGCAAGCATGTATGAACCAAAAAATATTCTGATAACCGGTGCAGCTGGTTTTATAGCCTCTCATGTCACTACAAGGCTAATTGACAGGTATCCTAGCTACAAGATTGTAGCACTTGACAAAGTGGACTATTGCTCCTCTGTCAAAAATCTGCAATCATGTTCCAAATCACCGAACTTTAAGTTCATCAAAGGTGACATAGCCACTGCTGATGTAGTGAACCACATTTTGATAGAAGAGGAAATAGACACCATTATGCATTTTGCTGCTCAAACACATGTGGACAATTCATTTGGAAATTCAATGGAATTCACCTACAACAACATCTATGGCACTCATGTGCTTCTTGAGGCCTGCAGGGTCACCAATGGTTGTGTCAAAAGGTTCATCCATGTTAGCACAGATGAAGTATATGGCGAAACAGACTTAGAGGATGATATTGGAAACCATGAGGCCTCTCAGCTTCTACCAACCAACCCTTATTCGGCTACGAAAGCTGGTGCTGAAATGTTGGTCATGGCTTATCACAGGTCTTATGGTCTTCCAATCATAACTTCTAGAGGGAACAATGTTTATGGTCCAAACCAGTATCCAGAGAAGCTTGTTCCTAAGTTCATTCTTCTTGCAATGAAGGGTGAGAAGTTGCCAATCCATGGAGATGGATCCAATGTGAGGAGCTACCTCCATTGTGGGGATGTGGCAGAAGCCTTTGATGTCATACTTCACAAAGGAGAGATTGGCCAAGTTTACAACATTGGCACTAAGAAAGAAAGGAGTGTGTTGGATGTGGCAGAGGAAATATGCAAACTCTTCAAATTGAATCCTAAGGATGTTATCGAGTTCGTTCAAGATAGGCCTTTCAATGACAAGAGGTACTTCCTTGATGATCAGAAGCTGAAAAAACTTGGTTGGGAGGAGAGAACTCAGTGGGAGGAAGGACTTAAGATGACGATTGATTGGTACAAAAAGAATCCGAATTGGTGGGGTGATGTATCTACTGCTTTGAACCCACATCCGAAGTTCTCGGCTATCAATCTCTCTGATGAGGCTCATTGGTCCTTCCAATATGGATACTCAAGGCTTGCAAGGTCATACACTGAGGTTGGTAGAAGAAAATCAGGGTTGAAGTTTTTGATATATGGGAGGACAGGTTGGATAGGGGGGTTGTTGGGAAAGCTTTGTGACGAAGAGAGCATTGATTGGGAATATGGGAGAGCAAGATTGGAAGATAGGAAATCACTTGTGGAGGATATGAAGAGGGTGAAGCCAACACATGTGTTGAGTGCAGCTGGTGTCACAGGAAGGCCTAATGTTGATTGGTGTGAATCACACAAAGTTGAAACTATAAGGACTAATGTAGTGGGGACTTTGACACTGGCTGATGTTTGCAAGGAACATGGCTTGTATATGTTGAATTTTGCAACTGGTTGCATATTTGAGTATGATAAAGAGCATCCTCTAGGATCAGGCATTGGCTTCAAGGAAGAGGACACACCAAATTTCACTGGTTCCTTCTATTCAAAGACCAAGGCCATGGTGGAGGACCTTCTAAAAAACTATGACAATGTGTGCACATTGAGAGTTAGAATGCCAATATCTTCAGATCTAAGCAATCCAAGAAACTTCATCACAAAGATTTCTCGATGCAACAAGGTGGTGAACATACCTAACAGCATGACAGTGCTAGATGAGCTCTTACCAATATCCATTGAAATGGCCAAGAGGAACTTGAAAGGGATATGGAACTTCACCAACCCTGGAGTCATTAGCCACAATCAGATATTAGAATTGTATAGGGATTACATAGATCCAAAGTTTAAATGGGAGAATTTTGATTTGCAAGAACAAGCAGAGGTAATAGTTGCTCAAAGGAGTAACAATGAAATGAATGCTTCCAAGATAAAAAATGAGTTCCCAGAATTGTTGTCCATCAGAGATTCCATTATCAAGTTTGTCTTTGAGCCTAACAAGAAAACTTGA 1989 0.4133 MSSKASMYEPKNILITGAAGFIASHVTTRLIDRYPSYKIVALDKVDYCSSVKNLQSCSKSPNFKFIKGDIATADVVNHILIEEEIDTIMHFAAQTHVDNSFGNSMEFTYNNIYGTHVLLEACRVTNGCVKRFIHVSTDEVYGETDLEDDIGNHEASQLLPTNPYSATKAGAEMLVMAYHRSYGLPIITSRGNNVYGPNQYPEKLVPKFILLAMKGEKLPIHGDGSNVRSYLHCGDVAEAFDVILHKGEIGQVYNIGTKKERSVLDVAEEICKLFKLNPKDVIEFVQDRPFNDKRYFLDDQKLKKLGWEERTQWEEGLKMTIDWYKKNPNWWGDVSTALNPHPKFSAINLSDEAHWSFQYGYSRLARSYTEVGRRKSGLKFLIYGRTGWIGGLLGKLCDEESIDWEYGRARLEDRKSLVEDMKRVKPTHVLSAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCKEHGLYMLNFATGCIFEYDKEHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEDLLKNYDNVCTLRVRMPISSDLSNPRNFITKISRCNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVISHNQILELYRDYIDPKFKWENFDLQEQAEVIVAQRSNNEMNASKIKNEFPELLSIRDSIIKFVFEPNKKT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1045 662 Gene3D - 13 318 - -
Aed6g1045 662 Gene3D - 205 327 - -
Aed6g1045 662 CDD dTDP_GD_SDR_e 11 329 IPR005888 GO:0008460|GO:0009225
Aed6g1045 662 Pfam NAD dependent epimerase/dehydratase family 408 544 IPR001509 -
Aed6g1045 662 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 335 IPR036291 -
Aed6g1045 662 Pfam GDP-mannose 4,6 dehydratase 14 320 IPR016040 -
Aed6g1045 662 Gene3D - 370 662 - -
Aed6g1045 662 PANTHER TRIFUNCTIONAL UDP-GLUCOSE 4,6-DEHYDRATASE/UDP-4-KETO-6-DEOXY-D-GLUCOSE 3,5-EPIMERASE/UDP-4-KETO-L-RHAMNOSE-REDUCTASE RHM3-LIKE 1 660 - -
Aed6g1045 662 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 660 - -
Aed6g1045 662 CDD dTDP_HR_like_SDR_e 379 651 - -
Aed6g1045 662 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 374 653 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1045 Aed-Chr6 14814147 14817411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1045 12 324 Miscellaneous Gene Families AT1G02000 25.298 4.65e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1045 K12450 - gmx:100776241 1278.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1045 6 14814147 14817411 Aed6g1045 6 14814147 14817411 ECH