Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1033 ATGGAGTTCTCTAGTGCCGCGAACAAGAAGCTCTTAGAAAATGGCACTTCTTATGACGACGACGACGATGAAGCCACAGACAGAAAAGGTGGCATGCGAACCATGCCCTTCATCATAGTGAACGAGAGTCTGGAGAAGGTGGCGAGTTACGGGATCATGCCCAACATGATACTGTATCTGATGAACTATTACGGCATGCAAATGGTGGAGGGTACAAATGGTTTAACCATTTTATGGTTAACTGCCATGATCCCAGAGCTAAGACCTTCTTGTAATTCACTCTTGCTAGGCTGCAACTCTGCTACAACAGCCCAACAAGCAGTATTGTTCATTTCCTTGGGATTCATTTCCATTGGAGCTGGTTGTATAAGACCTTGCTCCATAGCATTTGGAGCAGACCAACTCACAATTAAAGAAAGGTCCAATATTGATGAGAGGCTCTTGGATAGCTACTTTAATTGGTACTATACCTCAATTGGAGTATCAACTATGATTGCTTTGAGTGTAATTGCGTACATTCAAGAAAATCTTGGATGGAAAATTGGGTTTGGGATACCTGCTGTGCTAATGTTGCTATCAACTGTCAGTTTCATTCTGGGTTCACCTTTCTATACCAAAGTGAAGCCAGGTCACAGCTTACTCACTAGTTTTGCACAAGTAGTTGTGGTGGCTGTAAAGAACAGAAAATTAACTCTTCCTGATTGCAACTTTGATCAGTATCATCAAGACTGTGATTCAGAGCTGATGGTACCTACTGATAGCCTTAGGTACTTGTGTTTGAACAAAGCATGCATAATAAGAAATCCTGAGACAGTCTCAAACCCTGATCCATGGAGGCAATGCACAGTACGACAAGTGGAGTCAGTGAAATCTTTGCTCAGAATCCTTCCAATGTGGTCCACAGGCATCCTTATGATGGCCTCCCAAGGCTCATTCTCAACCCTCCAAGCAAATACCATGGACCGGAATTTGTTTGGCAGTTTCAAGATGCCTGCAGGATCCTTTAGCCTTATCATTCTAATCACAGCATCAATAGTCATTCCAATTTATGACCGCATAATGGTACCTATACTCGCAAAATACACAGGCTTGCCTAGAGGATTCGGGTGCAGAACTCGAATTGGGATAGGATTGTTGTTTGTATGTGCAACTAAGGCAACATCGGCTATCGTTGAAACTATGCGACGAAACGTTGCCATTGAAGAAGGCTTTGAGGACCAACCTAATGCTGTAACTCACATGTCGGTTTTATGGCTTTTTCCTGAGTTTGTTTTGCTTGGAATAGCCGAGGCTTTCAACCCAATTGGGCAGCTTGAGTTTTTCTACACTTATATTCCTAAGTCCATGTCTAGTTTTGCAATGGCTCTTGTCACTCTTCAATTTGCTATTGCTAGTGTAGTGGGAAGTGTGTTGGTGAGTATTGTGGACAAGGTCACTAGTGTAGGAGGAAACGAGAGTTGGTTATCAAATAACATTAATAGGGGCCACCTGAATTACTATTATGCACTGCTTAGTTGTTTAGGCATAGTTAACTACTTCTACTTTCTTGTTGTTTGTTGGGGTTATGGTTCTGCTTCGGGACAAACACTTGAAGCATCAGAAGACAGTGAAAAAGAGGAATTTAATTATAGGGAGTTACATACTTCGTAG 1650 0.4218 MEFSSAANKKLLENGTSYDDDDDEATDRKGGMRTMPFIIVNESLEKVASYGIMPNMILYLMNYYGMQMVEGTNGLTILWLTAMIPELRPSCNSLLLGCNSATTAQQAVLFISLGFISIGAGCIRPCSIAFGADQLTIKERSNIDERLLDSYFNWYYTSIGVSTMIALSVIAYIQENLGWKIGFGIPAVLMLLSTVSFILGSPFYTKVKPGHSLLTSFAQVVVVAVKNRKLTLPDCNFDQYHQDCDSELMVPTDSLRYLCLNKACIIRNPETVSNPDPWRQCTVRQVESVKSLLRILPMWSTGILMMASQGSFSTLQANTMDRNLFGSFKMPAGSFSLIILITASIVIPIYDRIMVPILAKYTGLPRGFGCRTRIGIGLLFVCATKATSAIVETMRRNVAIEEGFEDQPNAVTHMSVLWLFPEFVLLGIAEAFNPIGQLEFFYTYIPKSMSSFAMALVTLQFAIASVVGSVLVSIVDKVTSVGGNESWLSNNINRGHLNYYYALLSCLGIVNYFYFLVVCWGYGSASGQTLEASEDSEKEEFNYRELHTS 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1033 549 PANTHER OS01G0761500 PROTEIN 72 529 - -
Aed6g1033 549 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 25 72 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed6g1033 549 Pfam POT family 74 488 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed6g1033 549 PANTHER OS01G0761500 PROTEIN 25 72 - -
Aed6g1033 549 Gene3D MFS general substrate transporter like domains 5 529 IPR036259 -
Aed6g1033 549 SUPERFAMILY MFS general substrate transporter 105 518 IPR036259 -
Aed6g1033 549 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 72 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1033 Aed-Chr6 14593227 14599469 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1033 23 540 Organic Solute Cotransporters AT1G52190 44.056 6.04e-166 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1033 K14638 - gmx:100783985 832.402