Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1030 ATGGCAGAGGAGGCAGACTCGACGATGAGGACAGGGATATCAACGGGCAGCAATGAAGTGGTTGCTGCTGGTGTGAGGGAAGTAGAAGTGAGGATGAGGAGTCGGGTGAATGAGTGTCTGGAGAAAGTGGCAAGCTACGGGATCATGCCAAACATGATACTGTATCTGAGGGACGATTACCGCATGCCTATTGCCAAGGGCACAAGCATAATTTACACTTGGACTGCCGCCTCCGACGTCTTGTCCATCTTCGGGGCTTTTCTAGCAGATTCTTATTTTGGTCGGTTCCTCGGTCTAACCATGTTGTGGTTAACTGCCATTATCCCGGACCTAAAACCTACCTGTGAATCAGTATCAGACATGCTAGACTGCAACTCTGCTACATCACCCCAACTAGCAGTTTTGTTCCTTTCATTGGGATTAATTTCCATGGGAGCCGGTTGCGTCAGACCTTGTTCCATAGCCTTTGGAGCAGACCAACTGAGAATTAAAGAAAGATCCAATGATGAGAGGCTCTTGGATAGCTACTTCAATTGGTATTATACCTCAATTGCAATATCAACCATGGTTGCATTGAGTGTAATTGTGTACATTCAAGAAAATCTGGGGTGGAAAATTGGATTTGGACTACCTGCTTTGCTAATGTTTGTATCAGCTGTCAGTTTCATCCTTGGTTTGCCGTTCTATGCCAAAGTGAAGCCAGGTCACAACTTGCTCACTAGTTTTGTACAAGTAGTTGTGGTGGCTGTAAAGAACAGAAAACTTAGTCTTCCTGATTGCAAATTTGATCAGTACTATCATGACCGTGATTCGGAGCTTATGGTCCCTACTGATAGCCTTAGGTGTTTGAACAAAGCTTGTATAATAAGAAATCCTGAGACAGTCTCAAACCCTGATGGATCAGTTTCAGATCCATGGAGCCAATGCACAGTAGGACAAGTGGAATCGCTGAAATCTTTGATAAGACTCCTTCCTATGTGGTCCACAGGCATCTTTATGATGGTCTCCCAAGGCTCATTCTCTACCCTCCAAGCAACCACCATGGACAGAAGATTATTCGGCAATTTCAAGATGCCTGCAGGATCCTTCACTCTCATCATGGTGATGACCTTAGCAGTTGTCATTCCTGTGTATGACCGCATAATGGTACCTCTGCTAGCAAAATACTGCGGCATGCCAAGAGGATTCAGCACCAAAACTCGAATCGGGATAGGATTGCTGTTTGTATGCGTAGGTAAGGCAACATCGGCTGTAGTTGAAACCATGAGACGAAATGCGGCCATTGAACAAGGCTTTGAGGACCAACCTAATGCTGTAATTGACATGTCAGTTCTTTGGCTGTTTCCCGAGTTTATTCTGCTTGGATTTGGCGAAGCTTTCAGCCCAGTTGGACAAGTTGAGTTTTTCTATACTTATTTCCCCAAGTCCATGTCCAGTTTCGCAATGGCTCTTTTCACTCTTGAACTAGCTGCTTCTGGTGCAGTGGGAAGTGTGTTAGTTAGCATTGTGGACAAGGTCACTAGTGTTGGTGAAAACGAGGGCTGGTTAGCAACTAACATTAACAAGGGACATTTGAATTACTATTATGCATTGCTCACTTTCATAGGTATAATTAACTACTTCTACTTTCTTGCTATTTGTTGGGCTTATGGTTCTCCTCCAGGGCAAAAACTTGAAGCAGCTTCAGCAGGCAAGGAAGAAGAGCAATTTGATTACAGGGAATTACACTCTTCCTAG 1737 0.4444 MAEEADSTMRTGISTGSNEVVAAGVREVEVRMRSRVNECLEKVASYGIMPNMILYLRDDYRMPIAKGTSIIYTWTAASDVLSIFGAFLADSYFGRFLGLTMLWLTAIIPDLKPTCESVSDMLDCNSATSPQLAVLFLSLGLISMGAGCVRPCSIAFGADQLRIKERSNDERLLDSYFNWYYTSIAISTMVALSVIVYIQENLGWKIGFGLPALLMFVSAVSFILGLPFYAKVKPGHNLLTSFVQVVVVAVKNRKLSLPDCKFDQYYHDRDSELMVPTDSLRCLNKACIIRNPETVSNPDGSVSDPWSQCTVGQVESLKSLIRLLPMWSTGIFMMVSQGSFSTLQATTMDRRLFGNFKMPAGSFTLIMVMTLAVVIPVYDRIMVPLLAKYCGMPRGFSTKTRIGIGLLFVCVGKATSAVVETMRRNAAIEQGFEDQPNAVIDMSVLWLFPEFILLGFGEAFSPVGQVEFFYTYFPKSMSSFAMALFTLELAASGAVGSVLVSIVDKVTSVGENEGWLATNINKGHLNYYYALLTFIGIINYFYFLAICWAYGSPPGQKLEAASAGKEEEQFDYRELHSS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1030 578 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 36 556 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed6g1030 578 CDD MFS_NPF1_2 36 550 - -
Aed6g1030 578 Pfam POT family 96 516 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed6g1030 578 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 36 556 - -
Aed6g1030 578 Gene3D MFS general substrate transporter like domains 28 554 IPR036259 -
Aed6g1030 578 SUPERFAMILY MFS general substrate transporter 45 556 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1030 Aed-Chr6 14566377 14571020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1030 37 569 Organic Solute Cotransporters AT1G52190 47.645 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1030 K14638 - gmx:100789054 896.345