Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1020 ATGGCTTCTCCTCCGCATCGCTCTCGTATCGATCAGTTTTACTCTTCGAAGAAGAGGAAAGCTGCGTCGCCGGTTCCTAAAGCCGGGAGATTCGAAAAAGGTGCGGGGCATGAGGCTGATGCGTCTCCGAGTGCCAAAGGCTCTTTGGATGGTTACTTGGTTCCGTCGCAGGATGGTGGTAATGGTGAGGGTGGCTGCAGCAGTGTTGCGAACAAGGTTAAGAGAAACTTGACATCAGAGATTGGTTGTTCTCTTGACAATCAGCTTGATAAGCGCGCTGTTTCGTCGGGCCAAGGGTGTGGAGATTCTCAATCTACTCGGCTTGGCACGGCGAGTGAAATTGGACATGGTGCCGCGAATTCGGAGCTGAAACAGTTTGCAGCTGACTTTTTGTCTCTGTATTGCAGTCATCCAAGTGTGGATTTGGCGTCGGAGATGAAAGTGGATGATAACAAGAGAAATGGTTCCCTGGCATTAGTGGAGGGAAATAGTGGTTTATCGCAGAAGAATAATGACACTGTTGTTGAGCCATGTTTTGGTGGTGAAAATGTATCGGCAAGTGTGAAGATAGATGAAAACATCAAGTCTGGTGTTGTTGGAAATAATAATACTATGGGATATGTTCTTGGTTCTTGTATGAAGGTTTCTGGTGGTGGTGATACTACTGCCTTTGAAACAGGCTTTAGGAAATGTAGTAGTACACCTAAACCGTCAAAGAATATGGCTGAATTCTACACGCCAGGGTCTTTGATTGTTAAAGCAGGTGTTAGGGAGACTCCAAAGTCAACACGGGGCAGTTCATCATTTTCGCCTGGAGAGGCATTTTGGAATGAGGCAATTCAACTTGCTGATGGTTTGTGTGTTCCCATGGGTAATGATCCTTCTAAGGTTATAGGAGAAAGTAATGTGGTGGGAGAGGAACCTGAGATGAAGAACTCATGCAATTTACAAAATTATGATGGCAAGCAAAGGAAAATATTGGATCAAAGTAACAACAAAATCTGGAATAGGGAAATGGGTACTCCTTTAGGGTTAGTTGGGATGCACAGAAAAGATTCTGTGAAAGAAGCATCCAGCCTTCCTGTTAAACATTTTGATTTTTCGTTTGAAGACAACAGTTTGGAAGAAAATACCTTGCAAAATTGTTGTGTTGATGATCCGATCAATGTTACTTGTGTGGCTGGTAAACCGTATGATTCAGGTTCTATGATGGGTCATACACATGAAAAGATAAATGACGTGCAAGAAAAAAATTTAGTAGATACATTAGGCAAAAAGGTTTGCCAGGATAATGTTAGTATGACTTCTAATTCACCCTACAATGAGGTCAGGACACCAATTCCTGATGAAGCCAGTACTCCTTCAACTAGTGTATCACTTAATGATCATTTTAACCTAAACAGCTGGCTTCCTCCTGAAATATGCAGCATATATAGAATGAAAGGAATCTCAAGTCTTTACAGTTGGCAGGTTGATTGCCTTCGAGTAGATGGTGTCCTACAGAGAAGAAATCTTGTATATTGTGCTTCAACAAGTGCTGGTAAGAGTTTTGTTGCTGAGATTTTAATGCTGCGGAGGGTGATAATAACTGGAAAAATGGCACTACTTGTTCTCCCATATGTATCAATTTGTGCAGAAAAGGCAGAACACCTTGAACGTCTCCTTGAGCCACTTGGCAAACATGTTCGTAGTTATTATGGAAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTCTGCACAATAGAGAAGGCAAACTCACTAGTTAATAGATTACTGGAAGAGGGGCGTCTATCAGAAATGGGAATTATAGTAATTGATGAACTGCATATGGTTGGTGATCCAAGAAGAGGTTATCTTCTTGAACTTATGTTGACAAAGCTTCGTTATGCAGCAGGGGAAGGTATTCCAAAATCAAGTGATGGAGAAAGTGCAGGTGGAAGCAGTGATAAGGTTGATCCTGCACAAGGTCTGCAAATTGTTGGAATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTTCAAGCAGCATTATACCAGACAGAGTTCCGGCCAGTTCCCCTAGAAGAATATATAAAAGTTGGTAATTCCATTTACAACAAAAGTATGGAACTTTCTAAAACAATCTCAAAAGCGGCTGACCTAGGTGGTAAAGATCCAGATCATGTTGTTGAACTATGTAATGAGGTTGTTCAAGAGGGACACTCAGTTTTAATATTTTGCTCTAGCCGGAAGGGTTGTGAATCAACTGCAAAGCACATTGCAAAGTTCCTTAAAAGCTTTACTGTTAATGTTAATGATTGTGAGTTTGCTGATATTACTTCTGCTATTAACTCCTTGAGAAAGTGCCCTGCTGGGTTGGACCCCATATTAGAGGAAACTCTTCCTTCTGGTGTTGCATTTCATCATGCTGGCCTTACGGTTGAGGAACGAGAGATTGTTGAAACCTGTTATCGGAAGGGCCTTTTACGTGTTTTAACTGCCACATCAACCTTAGCAGCTGGGGTTAATCTGCCAGCTAGGAGGGTAATTTTCCGGCAACCTAGAATTGGTTGTGATTTTCTAGATGGGACGAGGTACAAACAGATGGCTGGTCGTGCTGGTCGAACTGGAATTGATACAAAGGGAGAAAGTATACTTATCTGTAAACCAGAGGAAATAAAAAAAGTTACAGGACTTCTGAATGAAAGCTGTCCTCCATTACATTCCTGTTTATCAGAAGACATAAATGGAATGACCCATGCAATCTTAGAAGTTGTGGCTGGGGGAATTGTTCAAACTGCTAGCGATATTAATCGGTATGTTAGATGTACTCTTTTGAATTCTACAAAACCATTTCTAGACGTGGTGAAATCTGCACAAGAATCCCTTCGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTACAGTACCACACCTCTTGGACATGCATCTTTTGGCAGTTCTCTTTGTCCAGAAGAATCACTTATTGTGTTAGCTGATCTTTCAAGGGCAAGGGAAGGATTTGTGCTTGCATCTGACTTGCATTTAGTTTACTTGGCGACACCAATCAATGTTGATGTTGAGCCGGATTGGGAATTGTACTATGAGCATTTTGTGAAATTGTCTCCGCTTGATCAGTCAGTTGGCAATCGAGTAGGTGTGACAGAACCATTCTTGATGTATATGGCACATGGCGCACCACTACGTGCTTCAAACAAGTCAAGAGATAATACAAGATCATTGCACAATCAACGAAGAAATCAATTTGGTATTTCCACTGCAAGGGCTAACTATGATGATCAAACTCTTCGTGTCTCTAGAAGATTCTATGTTGCTCTCATTTTGTCACTTCTAGTTCAGGAAACTCCTGTGGGTGTGGTTTGTGAAGCATTCAAAGTTGCCAGGGGAATGGTTCAAGCCTTGCAAGAGAATGCTGGTAGGTTTGCATCTATGGTTGCTGTGTTTTGCGAGAGACTTGGGTGGCATGATCTTGAAGGCTTAGTTGCTAAGTTTCAAAACCGTGTATCATTTGGAGTTAGAGCAGAGATTGTAGAACTTACCACCATTCCCTATGTTAAAGGTTCTCGAGCCAGATCACTCTATAAAGCAGGTTTACGTACACCTCTTGCAATTGCTGAAGCATCCATTCCTGAGATAGTAAAAGCACTTTTTGAATCTTCGTCATGGGCCACAGAAGGTTCTGCACAAAGGGGCTCCCAATTTGGTTTAGCAAAAAAGATAAAGAACGGTGCTCGCAAGATTGTTCTTGATAAAGCTGAGGAGGCAAGTAATGCAGCTTTCTCAGCCTTTAAGTCACTTGGGTTCAATGTCCCACAGTTTACTCCTCGCATATTATCTACTGCAGCTAGTAATTCTACCAGGCAAGAAGCTGGAAGTAACTCTGGAAGTGACACAACTGACACTAGTCGTAGTTTTGTTGATGCAGATCACATTGATAATACTAATAAATTTACTTTAGATAAAGAAAGAGAAGACTTAATAAAATTATCTGTTAATGGTGGTCTGGCTTCTGTAGAAGGAAAATCAAGCAGTGAGATGTTATGTAACTTGTCCACTGTTCCAGTTGCAGGACCTAAAATGGATGAGCTCAGTAGGACTTCTGACCATACCAAAAATCCAGTCATGAATGCTCTCTCTGTTCAATCACAGAAACCAAATGATAAATCTGGTGTACATAATGGGTGCCATGCTCAGTGTACAGAGGAACAACATAAGAATGACAGTTTGGCTAGTGGTAATGCTGATAGTTCCAGCCAGAAAGGTCCCATCAATGCAGTTGGTAGTCCTGGTGGGCTTGATTCATTTTTGGATCTATGGGACTCTATGCCTGAGTTCTACTTTGATATCCATTATATCAAACGATTGGAATTGCACTCTGCTGCCCCCTTCGAAATACATGGCATAGCCGTTTGTTGGGAACACTCTCCTGTGTACTACATTAATCTTCCCAGAGATATTCTATTGTCTGGCAGTAGAAAAGATGGCTGTTTATCCTTGAGTGCATGCAGCCAAAAGCAAAAAGTTTCTTCTAATTCTAAGCAAGATTTAGAGATTGCTAGATGTAGATGGAGCAGAATTAGTAAAATAATAGGGAAAAGAAATGTCAGAAAGTTCACCTGGAATTTAAAGGTTCAGATGCAGGTGCTGAAAAGGCCTGCTTTTTCAGTTCAGAGATTTGGTTGCTTGGACACACTTGGAAAAAGTATGGACCTTGAAGTTGTAGACAATTCTTACGTGTTATTGCCCCCTATACATGTTAAAGATGCAATTGATATGTGCATTGTGGCTTGGATTCTTTGGCCTGATGAAGAGAGTAGCTTTAGTCCAAACCTGGATAAGGAGGTAAAGAAGAGGTTATCCTCTGAGGATGCTGCAGTGGCCAATCAGAATGGCAGGTGGAAGAATCAGATGCGAAGGGCTGCTCATAATGGTTGCTGCCGTCGGGTTGCTCAAATACGAGCATTATGTTCTGTTCTTTGGAAATTACTTGTTTCTGAGAAACTTGTTGAAGTGCTTATGGGAATAGAAATCCCATTGGTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATCGGTGTTGATTTGGAGAGATGCACCCAGGCTCGTAAATTGTTGGTTAAAAGGCTGAAGTATCTTGAGAAGGAAGCTTACAAACTGGCTGGAATAACATTTTCATTAAATATGCCAGCAGATATTGCAAAAGTGCTGTATGAACACTTGAAGCTGCCCATACCTGAGGTGCGGAATAAGGGGAAAAAACATCCTAGTACTGACAAGCACTGTTTGGATGCACTTAGGCATGAACATCCCATTGTTCCAGTCATTAAAGAACACCGAACAATGGCAAAGCTGTTGAACTCTACGTTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTAAGCACACAGAAGTATACATTACATGGTCATTGGCTCCAGACATCCACGGCAACTGGTCGGCTTTCAATGGAGGAACCTAATCTTCAGGACAACTGGTTACTGTTAACAGCAGATTATTCTCAGATAGAATTGAGATTGATGGCACACTTCTCTAAAGACTCTTCACTTGTTGAACTTCTGAGTAAGCCTGATGGTGATGTCTTTACAATGATAGCAGCAAGATGGACTGGGTGTCCTGAAAGTTCTGTGGGTTCTCAGGAGAGAGAGCAGACCAAAAGGATGGTATATGGAATTCTTTATGGTATGGGTGCCAATAGCCTTGCAGAACAACTGGATTGCACTTCTGATGAAGCTGCTGAAAAGATTGCTAACTTCAAAAGCTCTTTTCCCGGTGTTGCTTCCTGGCTTTGTGAAGCCGTTGCCTCTTGTCGCAGTAAAGGATACGTGGAGACTCTAAAGGGAAGAAAACGATTTTTGTCAAAAATAAAATTCGGCAGCAGTACAGAAAAATCAAGAGCTCAGAGGCAATCTGTAAATTCCATTTGTCAAGGATCTGCAGCTGACATAATTAAGATTGCAATGTTAAGAATTTACTCTACAATTGTCACTGGATTTGATAGTCCGGATTCCAGTTCTTCACTAGCAACCAAGTTTCACATGCTTAAAGATCGTTGCCGGATTCTGTTACAGGTACATGATGAATTAGTGATGGAAGTTGATCCTTCTTTGATAAAAGAAGCAGCCTTACTATTACAGACAAGCATGGAAGATGCGGTCTCACTTCTTGTTCCTTTGCATGTCAAACTTAAGGTTGGAAGAACATGGGGATCTTTGGAGCCATTTACACCTGATAAATTCAAGGATGACACTCTTATGGCTGAATCCTGA 6327 0.416 MASPPHRSRIDQFYSSKKRKAASPVPKAGRFEKGAGHEADASPSAKGSLDGYLVPSQDGGNGEGGCSSVANKVKRNLTSEIGCSLDNQLDKRAVSSGQGCGDSQSTRLGTASEIGHGAANSELKQFAADFLSLYCSHPSVDLASEMKVDDNKRNGSLALVEGNSGLSQKNNDTVVEPCFGGENVSASVKIDENIKSGVVGNNNTMGYVLGSCMKVSGGGDTTAFETGFRKCSSTPKPSKNMAEFYTPGSLIVKAGVRETPKSTRGSSSFSPGEAFWNEAIQLADGLCVPMGNDPSKVIGESNVVGEEPEMKNSCNLQNYDGKQRKILDQSNNKIWNREMGTPLGLVGMHRKDSVKEASSLPVKHFDFSFEDNSLEENTLQNCCVDDPINVTCVAGKPYDSGSMMGHTHEKINDVQEKNLVDTLGKKVCQDNVSMTSNSPYNEVRTPIPDEASTPSTSVSLNDHFNLNSWLPPEICSIYRMKGISSLYSWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVIITGKMALLVLPYVSICAEKAEHLERLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLVNRLLEEGRLSEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAGEGIPKSSDGESAGGSSDKVDPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYIKVGNSIYNKSMELSKTISKAADLGGKDPDHVVELCNEVVQEGHSVLIFCSSRKGCESTAKHIAKFLKSFTVNVNDCEFADITSAINSLRKCPAGLDPILEETLPSGVAFHHAGLTVEEREIVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPRIGCDFLDGTRYKQMAGRAGRTGIDTKGESILICKPEEIKKVTGLLNESCPPLHSCLSEDINGMTHAILEVVAGGIVQTASDINRYVRCTLLNSTKPFLDVVKSAQESLRWLCQRKFLEWNEDTKLYSTTPLGHASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLATPINVDVEPDWELYYEHFVKLSPLDQSVGNRVGVTEPFLMYMAHGAPLRASNKSRDNTRSLHNQRRNQFGISTARANYDDQTLRVSRRFYVALILSLLVQETPVGVVCEAFKVARGMVQALQENAGRFASMVAVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPLAIAEASIPEIVKALFESSSWATEGSAQRGSQFGLAKKIKNGARKIVLDKAEEASNAAFSAFKSLGFNVPQFTPRILSTAASNSTRQEAGSNSGSDTTDTSRSFVDADHIDNTNKFTLDKEREDLIKLSVNGGLASVEGKSSSEMLCNLSTVPVAGPKMDELSRTSDHTKNPVMNALSVQSQKPNDKSGVHNGCHAQCTEEQHKNDSLASGNADSSSQKGPINAVGSPGGLDSFLDLWDSMPEFYFDIHYIKRLELHSAAPFEIHGIAVCWEHSPVYYINLPRDILLSGSRKDGCLSLSACSQKQKVSSNSKQDLEIARCRWSRISKIIGKRNVRKFTWNLKVQMQVLKRPAFSVQRFGCLDTLGKSMDLEVVDNSYVLLPPIHVKDAIDMCIVAWILWPDEESSFSPNLDKEVKKRLSSEDAAVANQNGRWKNQMRRAAHNGCCRRVAQIRALCSVLWKLLVSEKLVEVLMGIEIPLVNVLADMELWGIGVDLERCTQARKLLVKRLKYLEKEAYKLAGITFSLNMPADIAKVLYEHLKLPIPEVRNKGKKHPSTDKHCLDALRHEHPIVPVIKEHRTMAKLLNSTLGSICSLARLSVSTQKYTLHGHWLQTSTATGRLSMEEPNLQDNWLLLTADYSQIELRLMAHFSKDSSLVELLSKPDGDVFTMIAARWTGCPESSVGSQEREQTKRMVYGILYGMGANSLAEQLDCTSDEAAEKIANFKSSFPGVASWLCEAVASCRSKGYVETLKGRKRFLSKIKFGSSTEKSRAQRQSVNSICQGSAADIIKIAMLRIYSTIVTGFDSPDSSSSLATKFHMLKDRCRILLQVHDELVMEVDPSLIKEAALLLQTSMEDAVSLLVPLHVKLKVGRTWGSLEPFTPDKFKDDTLMAES 2108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1020 2108 CDD DEXHc_POLQ-like 470 691 - -
Aed6g1020 2108 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 891 IPR027417 -
Aed6g1020 2108 MobiDBLite consensus disorder prediction 1 67 - -
Aed6g1020 2108 SMART helicmild6 795 877 IPR001650 -
Aed6g1020 2108 SUPERFAMILY Sec63 N-terminal domain-like 1098 1222 - -
Aed6g1020 2108 Pfam DNA polymerase family A 1709 2089 IPR001098 GO:0003677|GO:0003887|GO:0006260
Aed6g1020 2108 SMART ultradead3 482 701 IPR014001 -
Aed6g1020 2108 PRINTS DNA-polymerase family A (pol I) signature 1820 1842 IPR002298 GO:0003887|GO:0006261
Aed6g1020 2108 PRINTS DNA-polymerase family A (pol I) signature 2039 2052 IPR002298 GO:0003887|GO:0006261
Aed6g1020 2108 Pfam Helix-turn-helix domain 882 973 IPR046931 -
Aed6g1020 2108 PANTHER DNA POLYMERASE THETA 486 2096 - -
Aed6g1020 2108 Gene3D Taq DNA Polymerase; Chain T, domain 4 1703 1812 - -
Aed6g1020 2108 Pfam Helicase conserved C-terminal domain 728 877 IPR001650 -
Aed6g1020 2108 MobiDBLite consensus disorder prediction 1294 1315 - -
Aed6g1020 2108 MobiDBLite consensus disorder prediction 1417 1437 - -
Aed6g1020 2108 Gene3D - 1829 2088 - -
Aed6g1020 2108 CDD DNA_pol_A_theta 1703 2091 - -
Aed6g1020 2108 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 496 688 IPR014001 -
Aed6g1020 2108 SUPERFAMILY DNA/RNA polymerases 1681 2091 IPR043502 -
Aed6g1020 2108 Pfam DEAD/DEAH box helicase 499 672 IPR011545 GO:0003676|GO:0005524
Aed6g1020 2108 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 728 926 IPR001650 -
Aed6g1020 2108 MobiDBLite consensus disorder prediction 1294 1319 - -
Aed6g1020 2108 Gene3D - 1855 1999 - -
Aed6g1020 2108 MobiDBLite consensus disorder prediction 1415 1437 - -
Aed6g1020 2108 SMART polaultra3 1837 2056 IPR001098 GO:0003677|GO:0003887|GO:0006260
Aed6g1020 2108 CDD SF2_C_Ski2 690 889 - -
Aed6g1020 2108 Gene3D - 469 691 IPR027417 -
Aed6g1020 2108 Gene3D - 1437 1700 IPR036397 GO:0003676
Aed6g1020 2108 PANTHER DNA POLYMERASE I 486 2096 IPR002298 GO:0003887|GO:0006261
Aed6g1020 2108 Gene3D - 698 897 IPR027417 -
Aed6g1020 2108 Gene3D - 1064 1208 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1020 K02349 - gmx:100813857 3711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1020 6 14251990 14279047 Aed6g1020 6 14251990 14279047 ECH