Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1017 ATGGACTATTGCTTGAGAGAGCTAGAAGGAAAGCAAGCACATGACCCTCTATTCCTAGAGAAAATGAAGAATAATACTATTTCATCATTGCCACCATTACCGTTACCATCACCGTTGTTGTCACTACCACAGACTAGTGAGAGATGTGTGTGGGTGCCAGGGGCAGTGATTGTGGGAGCAGGGCCATCAGGGCTAGCAACAGCAGCACACCTCAAAGAGAAAGGAGTGCCAAGCCTAATCCTAGAGAGATCCAACTGCATAGCATCCCTGTGGCAGCTCAAGACCTATGACAGGCTCCGCCTCCACTTGCCAAAGCAGTTCTGTGAACTCCCCTTAATGGGGTTCCCCTCACACTTCCCCACATACCCCACAAAGCAGCAGTTCATAGAGTACCTAGAGGGCTATGCCGAAAGGTTCGACATCATTCCAAGGCTCAACGAGACCGTCCAGAGTGCAGTGTTCGACGACGACGCGTCGTCAAACACAGGACTTTGGAGGGTGAAGAGCCTTGGCAAGAAGGGTGTGGTGACAGAGTTTGTGTGCAGGTGGCTGGTTGTGGCCACTGGGGAGAATGCAGAGGCTGTGGTGCCTCAGATTGAAGGAATGGGGGAGTTTGGTGGGACAATAAAGCACACAAGTTTGTATAAGAGTGGTGAAGAGTTTAGAGGGAAGAGGGTTTTGGTGGTTGGGTGTGGAAATTCTGGAATGGAAGTGTGCTTGGATCTTTGCAACCATAATGCTACTCCTTCGCTTGTGGTCAGAGATACAGTACACATCTTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTACTGAAGTGGCTTCCAATTCGGTTCGTGGACCGGTTCCTCCTCATAGTGTCATGGCTCATGCTTGGTGACACGGCTCGGTTCGGATTGGACCGGCCCAAAGTGGGTCCACTTCAGCTCAAAAACCTGTCCGGAAAGACACCAGTGCTAGATGTGGGTACCCTTGCAAAAATCAAAAGTGGACACATAAAGGTACGACCTGGAATCAAGCGGTTAAAACGTTATAAAGTTGAATTTGTTGATGGAAGGACAGAGAATTTTGATGCCATCATATTGGCAACTGGTTACAAAAGTAATGTTCCATTTTGGCTAAAGGAAGAGGATATGTTCTCTAAGGAAGATGGGTTCCCTACGAAGCCATTTCCAAATGGATGGAAAGGTGAGAATGGGCTCTATGCAGTTGGTTTCACCAAACGTGGACTACTTGGTACATCAATGGATGCCAAGAGAATAGCTCAAGACATTGAAAGGTGTTGGAAGGAAAAGCATAGCACAAATGCTTTTTCTCTATCACTTAATAATAACAATGTGCCACAATCCAATTCATGA 1374 0.4731 MDYCLRELEGKQAHDPLFLEKMKNNTISSLPPLPLPSPLLSLPQTSERCVWVPGAVIVGAGPSGLATAAHLKEKGVPSLILERSNCIASLWQLKTYDRLRLHLPKQFCELPLMGFPSHFPTYPTKQQFIEYLEGYAERFDIIPRLNETVQSAVFDDDASSNTGLWRVKSLGKKGVVTEFVCRWLVVATGENAEAVVPQIEGMGEFGGTIKHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHILPREMLGKSTFGLSMWLLKWLPIRFVDRFLLIVSWLMLGDTARFGLDRPKVGPLQLKNLSGKTPVLDVGTLAKIKSGHIKVRPGIKRLKRYKVEFVDGRTENFDAIILATGYKSNVPFWLKEEDMFSKEDGFPTKPFPNGWKGENGLYAVGFTKRGLLGTSMDAKRIAQDIERCWKEKHSTNAFSLSLNNNNVPQSNS 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1017 457 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 42 440 - -
Aed6g1017 457 Gene3D - 54 440 IPR036188 -
Aed6g1017 457 PRINTS Pyridine nucleotide disulphide reductase class-II signature 54 76 - -
Aed6g1017 457 PRINTS Pyridine nucleotide disulphide reductase class-II signature 221 245 - -
Aed6g1017 457 Pfam Flavin-binding monooxygenase-like 56 378 IPR020946 GO:0004499|GO:0050660|GO:0050661
Aed6g1017 457 SUPERFAMILY FAD/NAD(P)-binding domain 351 437 IPR036188 -
Aed6g1017 457 SUPERFAMILY FAD/NAD(P)-binding domain 56 331 IPR036188 -
Aed6g1017 457 PRINTS FAD-dependent pyridine nucleotide reductase signature 55 74 - -
Aed6g1017 457 PRINTS FAD-dependent pyridine nucleotide reductase signature 225 243 - -
Aed6g1017 457 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 42 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1017 Aed-Chr6 14138207 14143675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1017 K11816 - gmx:100804746 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1017 6 14138207 14143675 Aed6g1017 6 14138207 14143675 ECH