Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1016 ATGGCGTTTGCAGTTAGGGCTTTATCGGCAGTGAGAAAGAGTTGCAGGGGAAGCCCTCACCGTTACCGTTTCAGCCAACACTCACACTCACACTCACATTCACATTCAAATTCAAATTCAAATACAAATTCAAATCCACTTCTCCTGAAACTGCTTCAGGTTCCCAACTCTCGCATCAAAACGACGCTGGATCAGGAAATGGCTTCTCTTCAAAGCTCACAACAACCTTCTTGGGACTTTCTCGTTACCTCTCTCTCCCCTTCTTCTTCCGACAAAGCTCGATTGGTCTTGGAATGGATTTTGGAGAAGATGCTGAAGGAAAATGAGAAAGACCATGACCTCTTCTCTGAACTCATCTTTCTATGTGGAAAGGTGAAGGACGTGATGCTAGGAATACGCATTTTCAGTTCTATGGAGGCTGCAGGAGTTAAACCAACTTCTCTGGTTTTCAATTCTCTTATAAGTGTTTGTTTGTCTTCCCATGATGTTATTACAGCATGTGGTTTATTTGAGATCATGGAGAGGAGTTCTTCAGAGAGCAACAAACCTGATTTTCACACTTACAATATCTTCATTTCAGCGTTTTCCAAGTCAGGGAATGTTGATGCCATGCTAGCTTGGTACTCGGCGAAGAAGGCTGCCGGACTCGGTCCCGATCTTCAAATGTTCGAATCCCTTATATCAGGCTGTGTCAATTCTAGAAAGTTTGAGATTGCTGATAGAGTTTTCAAAGAAATGATGGTTTCTGGAGTTGTGCCTAGTGCAGCCATAGTTGAAAGCATGCTTGATGGGATTTGCAAGCAAAAGAGATTGGGCCGAGCGAAGGAGTTTTTTGAGTTTGCGATAGATTCTGGATGGGAAATAAATGAGAACATGGTTGATAAGTTGGTAGCATTGTATCATCAACAAGGGAAAGTGGAAGAAATGGAAGAGCTACTTGAAACTACGACGAAGCCCTGTGTTGTTATTACCACTACAACCTCCGGTGTTCTTGCACGAATTCATTGTGGGATTGTGAAGATGTATGCCATGTTAGATAGATTGGATGATGTGGAGTTTGCTGTGGGTAGAATGCTCAAACAAGGGTTGTCATTCACAAGTGCAGATGATGTTGAAAAGGTTATATGCTCATACTTTAGAAGGGAAGCTTATGATAGGCTAGACATATTCTTGGAATGTTTAAAGAAGAGTTGCTATGTGCTTCATAAATCAACTTATGAGTTGTTGATCTCTGGCTATAAAAGAGCACACTTGCTTGATAAAGTAGATAGGGTGATGGAAGACATGAAATCAGCAGGATTAGTCTAA 1308 0.4167 MAFAVRALSAVRKSCRGSPHRYRFSQHSHSHSHSHSNSNSNTNSNPLLLKLLQVPNSRIKTTLDQEMASLQSSQQPSWDFLVTSLSPSSSDKARLVLEWILEKMLKENEKDHDLFSELIFLCGKVKDVMLGIRIFSSMEAAGVKPTSLVFNSLISVCLSSHDVITACGLFEIMERSSSESNKPDFHTYNIFISAFSKSGNVDAMLAWYSAKKAAGLGPDLQMFESLISGCVNSRKFEIADRVFKEMMVSGVVPSAAIVESMLDGICKQKRLGRAKEFFEFAIDSGWEINENMVDKLVALYHQQGKVEEMEELLETTTKPCVVITTTTSGVLARIHCGIVKMYAMLDRLDDVEFAVGRMLKQGLSFTSADDVEKVICSYFRREAYDRLDIFLECLKKSCYVLHKSTYELLISGYKRAHLLDKVDRVMEDMKSAGLV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1016 435 MobiDBLite consensus disorder prediction 19 42 - -
Aed6g1016 435 Gene3D Tetratricopeptide repeat domain 182 338 IPR011990 GO:0005515
Aed6g1016 435 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 184 218 IPR002885 -
Aed6g1016 435 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 434 - -
Aed6g1016 435 Pfam Pentacotripeptide-repeat region of PRORP 152 331 IPR033443 -
Aed6g1016 435 Gene3D Tetratricopeptide repeat domain 68 178 IPR011990 GO:0005515
Aed6g1016 435 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 402 435 IPR002885 -
Aed6g1016 435 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2 434 - -
Aed6g1016 435 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 219 253 IPR002885 -
Aed6g1016 435 TIGRFAM PPR: pentatricopeptide repeat domain 405 435 IPR002885 -
Aed6g1016 435 TIGRFAM PPR: pentatricopeptide repeat domain 223 254 IPR002885 -
Aed6g1016 435 TIGRFAM PPR: pentatricopeptide repeat domain 186 209 IPR002885 -
Aed6g1016 435 Pfam PPR repeat 405 434 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g1016 91 434 Glycosyltransferase AT1G05670 22.487 1.35e-13 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1016 - - gmx:100778561 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1016 6 14056063 14059555 Aed6g1016 6 14056063 14059555 ECH