Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1012 ATGGCGCAACTTGGAGTCCCATTCAAGTTGCTGCAATCAAATTCAATACCACCATGCAATTACAAACTCAAACCCTCTCACATTAGCACTCTCAAACCCTCTCTTCCTCTTCCAAACTTCACCACCACCAAACCTTCTCTCCATCATGCCTTATCCACGCTCTGTTCCCGCCGCAGCACTCTCCTTGCACCACCCTGCAACTCCAACAAATCAGACATAATGTCGCAGTTGGAACTTGGGAAAAAGGAGGATAAGGGGAGACCGGAGAAACGAGTCAATGGTATATTCTGGATCATTCTCCTCAACATTGCCATCTTTGTCACCGACCACTTTTTTCAGGTTAATGGGATCAAGGCTTTGTACTTGTACCACAATTGGCCAGCTTGGTTCCAGTTTGTGACAGCTACATTTTGTCATGCTAATTGGAAGCATCTTTCTAGCAACCTTTTCTTCTTGTACATTTTTGGAAAGCTTGTTGAAGAAGAGGAAGGCAACTTTGCTTTGTGGCTTTCTTACATTCTAACTGGTGTAGGAGCAAACCTTGTTTCTTGGTTGCTTTTACCAAGAAATACAGTTTCTGTTGGAGCTTCTGGTGCTGTTTTTGGGTTATTTACTATCAGTGTCCTTGTAAAGATGTCCTGGGATTGGAGGAAGATCCTTGAAGTGCTTATATTGGGTCAGTTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACATCATTATCAGGTCGTGGGGGCTACGCATTGCAAGGTGTAAATCACATTGCACATCTTTCTGGTGCTCTTGTTGGTGTGCTTTTGGTTTGGCTCCTTAGCAAAGTTCCTTCTGATCCTTCAAACCAATAA 852 0.4366 MAQLGVPFKLLQSNSIPPCNYKLKPSHISTLKPSLPLPNFTTTKPSLHHALSTLCSRRSTLLAPPCNSNKSDIMSQLELGKKEDKGRPEKRVNGIFWIILLNIAIFVTDHFFQVNGIKALYLYHNWPAWFQFVTATFCHANWKHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANLVSWLLLPRNTVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTSLSGRGGYALQGVNHIAHLSGALVGVLLVWLLSKVPSDPSNQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1012 283 SUPERFAMILY Rhomboid-like 93 277 IPR035952 -
Aed6g1012 283 Pfam Rhomboid family 129 275 IPR022764 GO:0004252|GO:0016021
Aed6g1012 283 PANTHER RHOMBOID-RELATED PROTEIN 53 281 - -
Aed6g1012 283 Gene3D - 89 278 IPR035952 -
Aed6g1012 283 PANTHER RHOMBOID-LIKE PROTEIN 11, CHLOROPLASTIC-RELATED 53 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1012 Aed-Chr6 14000826 14005431 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1012 - - gmx:100781449 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g1012 6 14000826 14005431 Aed6g1012 6 14000826 14005431 ECH