Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g1003 ATGTCTTCTCTGCAGTTCATCCCACAAACTTCCGCTAAACCGCTCGACCAATCTCTTTCCTTTCTGCGGCATGGCCAACGCCGCTTCCGTCGCCACTGCTCCGCCGCCGCTCTTGGCAGTTCCAACAATTCCGGAGCCTCGCTCGATTCCAAAACTCAAGTGTCTCGTGTTCCGCTTTTGACTTCCTCCGAGGCTTATGATAGGCTAAAAACATTTAGAGAAAATATAAAGAGCAAGCAACAGTTCCTTGCCATGTATTCTAGTATTTTTGGTGGGATAACAACAGACCCAGCTGCTATGGTTATTCCTATGGATGATCACATGGTCCATAGGGGCCATGGTGTCTTTGATACTGCAGCAATAATGGACGGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTAAGGTCAGCATTCATGTCTAAGATAGACCTTCCATTTGATCGTGAAAGCATTAGAAGAATACTCCTACAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGATCACTGAGATATTGGCTCTCAGCAGGACCTGGTGACTTTCAGTTATCTCCCTCTGGCTGCCACCAATCAAGTCTTTATGCAATAGTAATACAGGATCTGTCGTCGTCACCGTCCTCGCCTAGTTTCCGGGGCGTCAAAGTTGTTACTTCGTCTATTCCCATTAAACACCCCAAGTTTGCTGTCACCAAGAGTGTGAATTATCTTCCAAATGTGCTCTCAAAGGTGGAAGCTGAAGAAGCTGGTGCTTTTGTAGGCATTTGGCTTGATGGTGAAGGTTTTGTTGCTGAAGGGCCTAATATGAATGTGGCTTTTGTCACTAAAGAGAAGGAGTTTGTAATGCCACACTTTGACAAAATTCTAAGTGGCTGCACAGCTAAGAGAGTTTTGGCCCTTGCTGAGAGTATGTTAAGGGAGGGTAAGCTTAAGGGGATAAGGGTGGAAAATGTGACTGTTGAGGAAGGTAAGAAAGCAGATGAAATGATGCTTATTGGCAGTGGAATTCTTGTTTGCCCTGTTGTGCAGTGGGATGAGCAGGTTATTGGTGACGGCAAAGAAGGCCCTATAACACAGGCTCTCTTAAATCTAATTATTGAGGACATGAAATCAGGACCTTCCACTGTTCGTATACCTGTTCCTTATTGA 1152 0.4488 MSSLQFIPQTSAKPLDQSLSFLRHGQRRFRRHCSAAALGSSNNSGASLDSKTQVSRVPLLTSSEAYDRLKTFRENIKSKQQFLAMYSSIFGGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMDGYLYELDQHLDRFLRSAFMSKIDLPFDRESIRRILLQTVSASKCRKGSLRYWLSAGPGDFQLSPSGCHQSSLYAIVIQDLSSSPSSPSFRGVKVVTSSIPIKHPKFAVTKSVNYLPNVLSKVEAEEAGAFVGIWLDGEGFVAEGPNMNVAFVTKEKEFVMPHFDKILSGCTAKRVLALAESMLREGKLKGIRVENVTVEEGKKADEMMLIGSGILVCPVVQWDEQVIGDGKEGPITQALLNLIIEDMKSGPSTVRIPVPY 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g1003 383 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 90 371 IPR036038 GO:0003824
Aed6g1003 383 Gene3D - 61 201 IPR043131 -
Aed6g1003 383 PANTHER BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE-LIKE 55 382 - -
Aed6g1003 383 PANTHER AMINO-ACID AMINOTRANSFERASE 55 382 - -
Aed6g1003 383 CDD PLPDE_IV 106 366 - -
Aed6g1003 383 Pfam Amino-transferase class IV 114 344 IPR001544 GO:0003824
Aed6g1003 383 Gene3D - 207 375 IPR043132 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g1003 Aed-Chr6 13743892 13747326 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g1003 K18482 - gmx:100794026 664.84