Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0980 ATGGAACAAAGATGGGAAGGCAAGGTTTCAGCGAAGCTGAAAAACAGCACCAAGGAACAAGCATGGCCCCTCATAAAGGACTTCTTCAACCTCCACAAACGGTTCCCGACGCTTGCCACGTGCCACGGGATCCACGGATCCAATGGTGAGCCCGGCTGCATACGATTCTGTGCCGGGTCCTCCATCCCATCATCCAACGGCTCAGCAGCTGGGAGCGTGAGCTGGTCCAAGGAGAGGCTTGTGGCAGTTGATGATGTTGGTTTGAGCCTCAAGTATGAGATGGTGGACAACAATATTGGGTTCAGGTCGTACGAGTCAACTTTAAAGGTCTTCGACTACGACGATAACGATGATGATAGTAGATGCGTTTTGGAATGGTCCTTTGTGGTTGACCCTGTGCAAGGGTTGGTGCTTGAGGATCTGGTTAGGAAGTACCATGTGGGGCTTCAGCTTATGGCCCAGAAAATGGAGGGTGAAATTCAAAGCAGCTTTGGTGAGTGCTATATATATGAAATTAATTAA 522 0.4943 MEQRWEGKVSAKLKNSTKEQAWPLIKDFFNLHKRFPTLATCHGIHGSNGEPGCIRFCAGSSIPSSNGSAAGSVSWSKERLVAVDDVGLSLKYEMVDNNIGFRSYESTLKVFDYDDNDDDSRCVLEWSFVVDPVQGLVLEDLVRKYHVGLQLMAQKMEGEIQSSFGECYIYEIN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0980 173 PANTHER - 2 163 - -
Aed6g0980 173 Pfam Polyketide cyclase / dehydrase and lipid transport 17 148 IPR019587 -
Aed6g0980 173 SUPERFAMILY Bet v1-like 17 149 - -
Aed6g0980 173 CDD PYR_PYL_RCAR_like 5 157 - -
Aed6g0980 173 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 2 163 - -
Aed6g0980 173 Gene3D - 1 163 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0980 Aed-Chr6 12901489 12902010 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0980 - - gmx:100527896 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0980 6 12901489 12902010 Aed6g0980 6 12901489 12902010 ECH