Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0678 ATGAGAGAGTGCATTTCAATCCACATTGGCCAGGCCGGGATTCAGGTCGGCAACACCTGCTGGGAGCTTTATTGCCTCGAACATGGCATTCAGTATGATGGGCAGATGTCAAGTGATAAGACTGTTGGTGGAGGTGATGATGCTTTCAACACATTCTTCAGTGAAACTGGGGCTGGAAAGCATGTTCCTCGTGCCATTTTTGTAGATCTTGAGCCCACTGTGATCGACGAATTGGAAAGGAGATTGTTGAGCTTTGCTTGGACCGCATCAGAAAGCTTACCGACAACTGCACTGGCCTCCAAGGTTTTCTGGTTTTTAATGCTGTGGGTGGTGGCACCGGCTCTGGTCATATCCTCACTGACTGCTTCCCTGAGGTTTGATGGTGCCTTGAACGTTGATGTCAATGAATTCCAGACCAACCTAGTCCCATACCCGAGAATCCACTTCATGCTTTCATCTTATGCTCCTGTGATCTCAGCTGAGAAGGCTCACCACGAGCAGCTATCAGTTGGTGAAATCACCAACAGCGCATTTGAGCCATCTTCTATGATGGCCAAGTGTGATCCGCGCCATGGCAAATACATGGCTTGTTGTCTCATGTACAGAGGTGATGTGGTGCCTAAGGATGTGAATGCGGCTGTGGGAATCATCAAGACCAAGCGCACTATTCAGTTTGTCGATTGGTGCCCCACTGGGTTCAAGTGTGGAATCAATTACCAGCCTCCAACCGTTGTTCCGGGTGGTGATCTTGCCAAGGTGAAGAGGGCTGTGTGCATGATCTCCAACTCCACCAGTGTCGTCGAGGTCTTTTCTCGTATTGACCACAAATTTGACCTTATGTATTCCAAGAGGGCATTTGTTCATTGGTATGTTGGTGAGGGTATGGAAGAGGGAGAGTTCTCTGAGGCTCGCGAGGATCTTGCTGCCCTGGAGAAAGATTATGAGGAAGTTGGTGCAGAGGCTACTGAAGAAGATGGTGATGAAGGAGATGATTATTGA 999 0.4875 MRECISIHIGQAGIQVGNTCWELYCLEHGIQYDGQMSSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDELERRLLSFAWTASESLPTTALASKVFWFLMLWVVAPALVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAHHEQLSVGEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGIIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVKRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEATEEDGDEGDDY 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0678 332 PANTHER TUBULIN ALPHA-6 CHAIN 115 331 - -
Aed6g0678 332 PANTHER TUBULIN ALPHA-6 CHAIN 1 79 - -
Aed6g0678 332 Gene3D Tubulin/FtsZ, GTPase domain 111 150 IPR036525 -
Aed6g0678 332 PRINTS Alpha-tubulin signature 45 58 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed6g0678 332 PRINTS Alpha-tubulin signature 18 33 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Aed6g0678 332 SUPERFAMILY Tubulin C-terminal domain-like 128 318 IPR008280 -
Aed6g0678 332 Gene3D Tubulin/FtsZ, GTPase domain 1 92 IPR036525 -
Aed6g0678 332 PRINTS Tubulin signature 53 72 IPR000217 GO:0005874|GO:0007017
Aed6g0678 332 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Aed6g0678 332 Gene3D Helix hairpin bin 266 318 IPR023123 -
Aed6g0678 332 SMART Tubulin_C_4 130 275 IPR018316 -
Aed6g0678 332 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 83 IPR036525 -
Aed6g0678 332 CDD alpha_tubulin 2 317 - -
Aed6g0678 332 Pfam Tubulin/FtsZ family, GTPase domain 3 81 IPR003008 GO:0005525
Aed6g0678 332 PANTHER TUBULIN 115 331 IPR000217 GO:0005874|GO:0007017
Aed6g0678 332 PANTHER TUBULIN 1 79 IPR000217 GO:0005874|GO:0007017
Aed6g0678 332 Gene3D - 151 265 IPR037103 -
Aed6g0678 332 Coils Coil 300 320 - -
Aed6g0678 332 Pfam Tubulin C-terminal domain 145 274 IPR018316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0678 Aed-Chr6 5900824 5903586 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0678 K07374 - ehx:EMIHUDRAFT_106820 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0678 6 5900824 5903586 Aed11g1519 11 19459126 19460989 PCT