Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0624 ATGGCCGAATCGGTGGAGCTGCCGAGTCGCTTGGCGATTCTCCCCTTCAGGAACAAGGTCCTCCTTCCCGGCGCCATCATCAGAATCCGCTGCACTTCCCCCACCAGTGTGAAGTTGGTGGAACAAGAACTTTGGCAGCGAGAAGAGAAGGGATTGATTGGCATCCTGCCAGTGCGTGATGCTGCTGAAATTAAGCCACTGGGTACCACTCTATCTGAAGGAATTGATTCTGCAAACCAAAACTCAAAAGTTCAAGGTGGTTCATCGGATTCTCATAAGCTTGATACAAAAAAGCAGAATGATGTTGTTCATTGGCATAACAGGGGGGTAGCTGCCCGACCATTACATTTATCAAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATACACAGTTGTTCTTGAAGGTTTGTGCAGATTTAGTGTCCAGGAACTGAGCATGAGAGGAATATACCATACTGCGAAGATAACTTCCCTTGAAATGTCTAAGATTGAACTGGAACAAGTGGAGCAAGACCCAGATTTCATAATGTTGTCTCGCCAATTTAAAGCTACTGCAATGGAGCTTATTTCTGTTCTGGAGCTGAAACAAAAAACTGGTGGAAGGACAAAAGTCCTTTTGGACAACGTTCCAGTTCACAAGTTGGCTGATATATTTGTTGCTAGTTTTGAGATAAGTTTTGAAGAACAATTATCTATGCTGGATTCCGTTGACCCCAAAGTGAGGCTTTCAAAAGCAACTGAGTTAGTTGACAGGCATTTACAGTCAATTCGTGTAGCTGAGAAAATTACACAAAAGGTTGAAGGACAATTGTCAAAATCTCAAAAAGAATTTCTTTTGCGCCAGCAGATGAGGGCTATAAAAGAGGAACTTGGTGATAATGATGATGATGAAGATGACCTGGTTGCCCTTGAAAGAAAGATGCAAAGTGCAGGAATGCCACAGAATGTATGGAAACATGCACACAGAGAGTTGAGGAGGCTTAAAAAAATGCAGCCTCAGCAACCAGGGTATAACAGTTCAAGGGTTTACCTAGAGCTTCTTGCTGATCTTCCCTGGCAGAAGGCCAGTGAAGAAACTGAACTGGACTTAAGAGCTGCACAGAAGCGGCTTGATAGTGATCACTATGGTTTAGTGAAGGTTAAGCAACGGATAATTGAATACCTGGCGGTTCGCAAGCTTAAACCAGATGCAAGGGGTCCTGTGTTGTGTTTTGTTGGACCACCAGGTGTTGGGAAAACATCATTGGCATCTTCTATTGCTGCTGCTTTGGGAAGAAAATTTGTACGCATATCCCTTGGTGGAGTCAAGGATGAGGCTGATATTAGAGGACATAGGAGAACATATGTGGGAAGCATGCCTGGGAGGCTTATAGAAGGATTAAAGAGAGTAGCTGTTTGCAATCCTGTCATGTTGCTTGATGAAGTTGACAAGACAGGTTCTGATATTCGTGGAGATCCAGCTTCAGCATTGCTAGAGGTAGTTTTTGTGGCTACAGCAAATAGGTTGCAACCCATTCCTCCACCACTTCGTGATAGGATGGAAGTAATTGAGCTTCCTGGATATACACCTGAGGAAAAGCTCCACATTGCCATGCGACATTTGATTCCAAGAGTTTTAGACCAGCATGGATTGAGTTCAGAGTTTCTTCAGATTCCTGAGGCAATGGTGAAGCTTGTCATTCAGAGTTATACTAGGGAAGCTGGTGTGCGAAACTTGGAGAGGAATCTAGCTGCCTTGGCTCGAGCTGCTGCAGTAAGAGTTTTAGAGCAAGAACAAGTAGTTCCATTAAACAAAGGGATGCAGGGACTTGCTACACCACTTGTGGAAAATAGACTTGCTGATGGAAGTGAAGTTGAAATGGAAGTGATACCAATGGGTGTCAATAGTCGGGACATCTCAAACACGTTTAGGATTGCTTCTCCATTGGTTGTTGACGAAACTATGCTTGGAAAAGTGCTTGGGCCCCCAAGATTTGATGGTAGCGAAGCTGCAGAACGCGTGGCTTCCCCTGGGGTCTCTGTTGGGCTAGTTTGGACTGCTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTACAGCTATGGTTGGGAAGGGTGAACTGCATCTCACTGGACAACTTGGTGATGTAATAAAGGAATCAGCTCAGATTGCACTAACATGGGTAAGGGCGAGGGCAACTGATCTTAGGCTTGCTGCTACAGAGGGATTTAATCTTTTGGAGGGCCGTGATGTACACATACATTTTCCTGCGGGTGCTGTACCTAAAGATGGGCCCTCAGCAGGTGTGACTTTGGTCACGGCATTGGTATCACTTTTCAGTCAGCAAAGGGTGAGATCAGACACGGCTATGACTGGAGAGATGACATTGAGGGGTCTTGTTCTACCTGTTGGTGGTGTCAAGGATAAGATATTAGCTGCACATCGTTACGGTATCAAGAGAGTTATCCTGCCTGAAAGGAACTTGAAGGACTTGGTTGAAGTACCATCATCAGTGCTAGCCAATTTGGAGATCCTGCTTGCTAAACGAGTGGAAGATGTGTTAGAGCATGCTTTTGATGGTGGGTGCCCTTGGAGGCAACACTCAAAGTTATAG 2592 0.4522 MAESVELPSRLAILPFRNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGLIGILPVRDAAEIKPLGTTLSEGIDSANQNSKVQGGSSDSHKLDTKKQNDVVHWHNRGVAARPLHLSRGVEKPSGRVTYTVVLEGLCRFSVQELSMRGIYHTAKITSLEMSKIELEQVEQDPDFIMLSRQFKATAMELISVLELKQKTGGRTKVLLDNVPVHKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDLVALERKMQSAGMPQNVWKHAHRELRRLKKMQPQQPGYNSSRVYLELLADLPWQKASEETELDLRAAQKRLDSDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYVGSMPGRLIEGLKRVAVCNPVMLLDEVDKTGSDIRGDPASALLEVVFVATANRLQPIPPPLRDRMEVIELPGYTPEEKLHIAMRHLIPRVLDQHGLSSEFLQIPEAMVKLVIQSYTREAGVRNLERNLAALARAAAVRVLEQEQVVPLNKGMQGLATPLVENRLADGSEVEMEVIPMGVNSRDISNTFRIASPLVVDETMLGKVLGPPRFDGSEAAERVASPGVSVGLVWTAFGGEVQFVEATAMVGKGELHLTGQLGDVIKESAQIALTWVRARATDLRLAATEGFNLLEGRDVHIHFPAGAVPKDGPSAGVTLVTALVSLFSQQRVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLVEVPSSVLANLEILLAKRVEDVLEHAFDGGCPWRQHSKL 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0624 863 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 252 IPR003111 -
Aed6g0624 863 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 495 - -
Aed6g0624 863 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 495 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Aed6g0624 863 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 863 IPR027501 GO:0004252|GO:0006515
Aed6g0624 863 Gene3D - 303 351 - -
Aed6g0624 863 Coils Coil 287 307 - -
Aed6g0624 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 594 IPR027417 -
Aed6g0624 863 MobiDBLite consensus disorder prediction 72 96 - -
Aed6g0624 863 Gene3D - 520 608 - -
Aed6g0624 863 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 783 802 - -
Aed6g0624 863 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 806 824 - -
Aed6g0624 863 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 753 772 - -
Aed6g0624 863 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 671 687 - -
Aed6g0624 863 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 407 426 - -
Aed6g0624 863 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 494 863 - -
Aed6g0624 863 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 756 764 IPR008268 GO:0004176|GO:0004252|GO:0006508
Aed6g0624 863 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 494 863 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Aed6g0624 863 Pfam Lon protease (S16) C-terminal proteolytic domain 645 851 IPR008269 GO:0004176|GO:0004252|GO:0006508
Aed6g0624 863 Gene3D - 364 519 IPR027417 -
Aed6g0624 863 CDD AAA 384 522 - -
Aed6g0624 863 MobiDBLite consensus disorder prediction 72 89 - -
Aed6g0624 863 Gene3D - 1 160 IPR046336 -
Aed6g0624 863 ProSiteProfiles Lon N-terminal domain profile. 11 252 IPR003111 -
Aed6g0624 863 SUPERFAMILY Ribosomal protein S5 domain 2-like 671 851 IPR020568 -
Aed6g0624 863 Pfam ATPase family associated with various cellular activities (AAA) 403 517 IPR003959 GO:0005524|GO:0016887
Aed6g0624 863 ProSiteProfiles Lon proteolytic domain profile. 668 853 IPR008269 GO:0004176|GO:0004252|GO:0006508
Aed6g0624 863 Gene3D - 171 295 - -
Aed6g0624 863 SMART lon_5 10 252 IPR003111 -
Aed6g0624 863 PIRSF Lon_proteas 630 854 IPR004815 GO:0004176|GO:0005524|GO:0006508
Aed6g0624 863 PIRSF Lon_proteas 493 602 IPR004815 GO:0004176|GO:0005524|GO:0006508
Aed6g0624 863 PIRSF Lon_proteas 1 495 IPR004815 GO:0004176|GO:0005524|GO:0006508
Aed6g0624 863 SUPERFAMILY PUA domain-like 10 251 IPR015947 -
Aed6g0624 863 SMART AAA_5 399 521 IPR003593 -
Aed6g0624 863 Gene3D - 670 855 IPR014721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0624 Aed-Chr6 5344277 5354891 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0624 K01338 - gmx:100789982 1571.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0624 6 5344277 5354891 Aed6g0624 6 5344277 5354891 ECH