Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0611 ATGTTAATTGCACTTCTTTTTGAGTCGGAAATGAAGTTGGCAGATGATGTCATAGAAACAATTCTTGACAAGACTTTCGTGGAAGCTGACCTAAAGCAAGATGGGAAAATCGACTTTGACGAGTGGAAAAATTTTGTTACTAAGAATCCGTCACTATTAAAAATAATGACCCTGCCTTATCTGAGGGACATAACAACATCCTTCCCCAGTTTCATTTTTAACTCTAACGTGGATGAGATTGCTGCATAA 249 0.3735 MLIALLFESEMKLADDVIETILDKTFVEADLKQDGKIDFDEWKNFVTKNPSLLKIMTLPYLRDITTSFPSFIFNSNVDEIAA 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0611 82 PANTHER CALCINEURIN B 1 81 IPR045198 GO:0005509|GO:0019722|GO:0019900
Aed6g0611 82 SUPERFAMILY EF-hand 2 71 IPR011992 -
Aed6g0611 82 PANTHER CALCINEURIN B-LIKE MOLECULE 1 81 - -
Aed6g0611 82 ProSiteProfiles EF-hand calcium-binding domain profile. 17 52 IPR002048 GO:0005509
Aed6g0611 82 Pfam EF hand 22 46 IPR002048 GO:0005509
Aed6g0611 82 Gene3D - 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0611 Aed-Chr6 5201038 5205299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0611 1 81 EF-hand Containing Proteins AT4G17615 79.012 8.73e-40 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0611 K06268 - gmx:100527380 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0611 6 5201038 5205299 Aed6g0611 6 5201038 5205299 ECH
Aed11g1572 11 19879344 19882897 Aed6g0611 6 5201038 5205299 PCT