Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0602 ATGGAGGTTGCCACAACAGCTTCTAGCTTCGCACTCAACAAGCCCATGCTGGCATTGCCCTCTTCTTCATCTCGAATCTCAACCTCTATCAGAGCCATGAACTCCTCCACCTCCTCCGTCGTCAGGACCTCTCTCTCCACCAACTTCGTCGCTCCTTGCGCCGGAATCAGCAGTGCCTCTAGCCTCTTCTCCGGCCACAAGCTCCGACCCTCCTCCCTCAATCCGGCGTCGTTTCGTGGCTCCAACGCCAAACGAGGCGTCGTTACTATGGTCATTCCTTTTCAAAGAGGAAGTGCATGGGAGCAACCTCCACCAGACTTAGCTTCTTACTTGTACAAAAATCGAATTGTTTATTTGGGCATGTCTCTTGTTCCATCTGTCACTGAGTTGATACTAGCTGAATTTCTTTACCTTCAATATGAAGATGATGATAAGCCTATTTACCTATACATAAACTCCACTGGGACAACTAAGGGAGGTGAGAAGTTGGGTTATGAGACTGAGGCCTTTGCAATATATGACGTGATGAGGCAAGTTGTTTTGATACAGCCAATTGCAAGGTTTCAAGGTCAAGCAACAGATGTTAACCTTTTAAGAAGAGAAGTCAATAATGTGAAGACAGAATTGGTTAATTTGTATGCAAAGCATATGGAAAAAACACCTGAGCAGATTGAAGCTGATATTCAGCGTCCAAAGTATTTTAGCCCTAGTGAAGCTCTAGAGTATGGAATCATAGATAAGGTTATATACAATGATAGGGGCTTTGAAGACCGTGGAGTTGTTTCTGACCTTAAAAAGGCACGGCTTATTTGA 813 0.4477 MEVATTASSFALNKPMLALPSSSSRISTSIRAMNSSTSSVVRTSLSTNFVAPCAGISSASSLFSGHKLRPSSLNPASFRGSNAKRGVVTMVIPFQRGSAWEQPPPDLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGYETEAFAIYDVMRQVVLIQPIARFQGQATDVNLLRREVNNVKTELVNLYAKHMEKTPEQIEADIQRPKYFSPSEALEYGIIDKVIYNDRGFEDRGVVSDLKKARLI 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0602 270 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 13 179 IPR023562 -
Aed6g0602 270 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 179 268 IPR023562 -
Aed6g0602 270 CDD S14_ClpP_2 106 248 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aed6g0602 270 PRINTS Clp protease catalytic subunit P signature 146 166 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aed6g0602 270 PRINTS Clp protease catalytic subunit P signature 227 246 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aed6g0602 270 PRINTS Clp protease catalytic subunit P signature 106 121 IPR001907 GO:0004176|GO:0004252|GO:0006508
Aed6g0602 270 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 13 179 - -
Aed6g0602 270 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 179 268 - -
Aed6g0602 270 Gene3D - 182 253 - -
Aed6g0602 270 SUPERFAMILY ClpP/crotonase 101 251 IPR029045 -
Aed6g0602 270 Pfam Clp protease 178 250 IPR023562 -
Aed6g0602 270 Gene3D - 79 181 - -
Aed6g0602 270 Coils Coil 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0602 Aed-Chr6 5089563 5096437 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0602 K01358 - gmx:100785827 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0602 6 5089563 5096437 Aed6g0602 6 5089563 5096437 ECH