Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0530 ATGTCTCCAAAAATATCAAAGGCTAAAGCTATGTTCTTCATCTTGAAAATATTAATGTTAAATGCTTTGCCACCAATATATGCATGTGGGCCCTGCACTCCGCCACGTCACCACAAAAAGCCGCCGCATCACGGAGGAGGCCGGCCGAAAGTGTCCCCGCCGCCGATGCCGCCGATCATAATCAACCCTCCGGTGGTGGTGCCACCGCCGGTGGTGATATATCCTCCACCAGCTTCACCGGTGTACCCGACGCCGCCGCAGCGGACATGCCCCATTGATGCCCTAAAGTTGGGGCTTTGCTTGGACGTGCTTGGAGGATTGGTGCATGTGGGAATAGGGAACCCAGCTGAGAACGTGTGCTGTCCCGTTATACAAGGGTTGCTTGATCTTGAAGCTGCGATTTGTCTTTGCAATGTTATTAGGGCTAAGCTTCTTAACCTAAATATCTTCCTTCCTCTTGCACTTCAAGTCTTGGTCACTTGCGGGAAGACTCCTCCCCCTGGTTTTGTTTGTCCACCGCTGCATTAA 528 0.517 MSPKISKAKAMFFILKILMLNALPPIYACGPCTPPRHHKKPPHHGGGRPKVSPPPMPPIIINPPVVVPPPVVIYPPPASPVYPTPPQRTCPIDALKLGLCLDVLGGLVHVGIGNPAENVCCPVIQGLLDLEAAICLCNVIRAKLLNLNIFLPLALQVLVTCGKTPPPGFVCPPLH 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0530 175 Pfam Hydrophobic seed protein 89 172 IPR027923 -
Aed6g0530 175 CDD HPS_like 89 171 IPR027923 -
Aed6g0530 175 PANTHER - 6 173 - -
Aed6g0530 175 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 92 173 IPR036312 -
Aed6g0530 175 Gene3D - 87 173 IPR036312 -
Aed6g0530 175 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 173 - -
Aed6g0530 175 SMART aai_6 90 171 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0530 Aed-Chr6 4550337 4550864 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0530 83 173 Acyl Lipid Metabolism Gene Families AT4G22490 35.165 2.78e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0530 - - gmx:100802510 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0530 6 4550337 4550864 Aed6g0530 6 4550337 4550864 ECH