Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0523 ATGGGTTCCAAAACTCGCTCTTCCCTTTCTCTTTTCCTCACAATCAACATTCTCTTTTTTGCCCTTGCCTCTGCCTGCGGAACATGCCCTAGCCCTACACCAAGGCATAAGCACAAGCCCGTGGAGCCAACCCCTTCAGGTGGCTACGGTGGTTCAGGAGGCCCTGGTGGTTCGGGTGGTTCAGGTGGTTCAGGAGGTTCAGGTGGTTCAGGTGGTTCAGGAGGCTCAGGTGGCTCAGGAGGCCCAGGTGGTTCAGGTGGATCTGGTGGCTCAGGTGGTTCGGGTGGCTCTTGCCCTCGTGATGCACTCAAGCTAGGTGTATGCGCCAATGTGCTTAACTTGGTCAACGTGAAATTGGGTCAACCACCAGTTACACCTTGTTGCTCTCTCCTCGATGGTCTCGTTGACCTTGAGGCTGCAGTGTGCCTTTGCACTGCCCTAAGAGCAAACATTTTGGGAATAAACCTTAACCTTCCCATCTCACTCAGCTTGCTTCTCAATGTTTGCTCAAGGCAAGCCCCACGTGGCTTCCAATGTGCCTAA 543 0.5378 MGSKTRSSLSLFLTINILFFALASACGTCPSPTPRHKHKPVEPTPSGGYGGSGGPGGSGGSGGSGGSGGSGGSGGSGGSGGPGGSGGSGGSGGSGGSCPRDALKLGVCANVLNLVNVKLGQPPVTPCCSLLDGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQAPRGFQCA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0523 180 SMART aai_6 98 179 IPR016140 -
Aed6g0523 180 PANTHER - 1 179 - -
Aed6g0523 180 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 100 179 IPR036312 -
Aed6g0523 180 PANTHER HYPRP2 1 179 - -
Aed6g0523 180 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Aed6g0523 180 CDD HPS_like 98 179 IPR027923 -
Aed6g0523 180 Gene3D - 98 180 IPR036312 -
Aed6g0523 180 MobiDBLite consensus disorder prediction 31 95 - -
Aed6g0523 180 Pfam Hydrophobic seed protein 98 180 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0523 Aed-Chr6 4521944 4522486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0523 93 179 Acyl Lipid Metabolism Gene Families AT4G22490 41.573 2.09e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0523 - - gmx:100798361 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0523 6 4521944 4522486 Aed6g0523 6 4521944 4522486 ECH