Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0456 ATGGGTACTGTTTGGTGGTGGAGGCTGCTTTTTTCTGCTCTTGCTGTGATTCACTTCTCTTCTCAACACTGTGCTTCTCAAAAAGCTCCGAACTACAAATTTATGCACAATGCAACGACGGCGCCAGACGTATCATACTATGACTACATCGTAATCGGCGGCGGCACCGCGGGGTGCCCTTTGGCCGCGACACTGTCCCAAAAGTACAGCGTGCTGCTCCTCGAACGCGGCGGGTCACCCTACGGCAACCCCAACATCACCGACTTAGCAGCCTTCGGCGCAGCCCTCTCTGACACCTCCCCCACCTCCCCGGCCCAGCGCTTCATCTCCGAAGACGGCGTCATCAACTCAAGAGCCCGCGTCCTCGGCGGCGGAAGTTGCTTGAACGCCGGCTTCTACACTCGCGCTAGCCCTCAATATGTAAGGGAAGCGGGGTGGGATGGAAGGGTAGTGAATGAGTCGTATACATGGGTGGAGAAGATAGTGGCGTTTCAGCCGGAAGTGAAGCAGTGGCAGTCAGCGGTGCGGGATGGGCTAGTGGAGATAGGTGTGGTGCCTAATAATGGTTTCACTTATGAACATATTCATGGGACTAAGGTTGGGGGAACCATCTTTGACCATAATGGCTTCAGGCACACCGCTGCTGATCTTCTCCAATATGCCAACCCCGCTGGAATTACCGTGCTTTTGAATTCCGCTGTGCATAGAATCTTGTTTAATGTCAAAAATGGATCAAAACCAACGGCACATGGAGTGGTGTTCAGAGATTCATTGGGTCGTAGACACAAGGCGTATCTCAAGAATGATCCAAGGAACGAGATCATCGTTTCGGCTGGTGCACTTGGAAGCCCACAGCTTCTAATGTTGAGTGGAATTGGGCCTGCGGACCACCTCAAGGCCCATAACATCAGAATTACATTGGATCAGCCGTCCGTAGGAAAGGGAATGTCGGATAATCCGATGAACGCCATCTTTATCCCATCTCCTGTCCCCGTGGAGGTCTCTCTCATTGAGGTGGTCGGCATCACTAGCTTCGGCAGCTACATTGAAGCTGCTAGTGGCGAAAACTTTTCCGGCGGCGGTCCTTCCTCAAAAAAAGACTACGGAATGTTCTCCCCAAAGATTGGGCAACTCTCAACGGTACCTCCAAAGCAAAGAACAGCTGAGGCACTTGCTAAGGCAACAAAAGAGATGGAAGCTCTGGACCCAGCAGCCTTAAGAGGCGGATTCATATTGGAGAAAATAATGGGTCCAATCTCAAGCGGGCACTTGGAGCTCCGAACCCTAAACCCGAACGACAACCCCTCAGTGACCTTCAACTACTTCCAGGACCCACGAGACTTAGAGCGATGCGTGCAGGGCCTCAGCATCGTCGAGAAGATAATCGAGTCCAAAGCATTCGCTCCCTTCAGATACCCGAACATGCCGGTGCCGGTGCTTCTCAACATGACTGCGAGTGCCCCCGTTAACTTGTTGCCCAAGCACACGAATTCGTCATTGTCACTGGAACAGTACTGCAGAGACACTGTGATGACCATTTGGCACTACCACGGAGGGTGCCAAGTTGGGAAAGTTGTCGATAGGGACTACCAGGTTCTTGGCGTCCAAGCACTGCGTGTTGTTGATGGCTCCACCTTTATTGACTCTCCCGGAACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTATATGGGACTTAAAATATTGAGCGAGAGGCTTGGCGCTGCTCATCAAACAGACCAATAA 1749 0.5214 MGTVWWWRLLFSALAVIHFSSQHCASQKAPNYKFMHNATTAPDVSYYDYIVIGGGTAGCPLAATLSQKYSVLLLERGGSPYGNPNITDLAAFGAALSDTSPTSPAQRFISEDGVINSRARVLGGGSCLNAGFYTRASPQYVREAGWDGRVVNESYTWVEKIVAFQPEVKQWQSAVRDGLVEIGVVPNNGFTYEHIHGTKVGGTIFDHNGFRHTAADLLQYANPAGITVLLNSAVHRILFNVKNGSKPTAHGVVFRDSLGRRHKAYLKNDPRNEIIVSAGALGSPQLLMLSGIGPADHLKAHNIRITLDQPSVGKGMSDNPMNAIFIPSPVPVEVSLIEVVGITSFGSYIEAASGENFSGGGPSSKKDYGMFSPKIGQLSTVPPKQRTAEALAKATKEMEALDPAALRGGFILEKIMGPISSGHLELRTLNPNDNPSVTFNYFQDPRDLERCVQGLSIVEKIIESKAFAPFRYPNMPVPVLLNMTASAPVNLLPKHTNSSLSLEQYCRDTVMTIWHYHGGCQVGKVVDRDYQVLGVQALRVVDGSTFIDSPGTNPQATVMMLGRYMGLKILSERLGAAHQTDQ 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0456 582 Pfam GMC oxidoreductase 47 320 IPR000172 GO:0016614|GO:0050660
Aed6g0456 582 Gene3D - 47 562 IPR036188 -
Aed6g0456 582 PIRSF Alcohol_oxidase 22 581 IPR012132 GO:0050660
Aed6g0456 582 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Aed6g0456 582 Pfam GMC oxidoreductase 418 563 IPR007867 GO:0016614
Aed6g0456 582 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 519 - -
Aed6g0456 582 SUPERFAMILY FAD/NAD(P)-binding domain 46 572 IPR036188 -
Aed6g0456 582 Gene3D - 164 512 - -
Aed6g0456 582 PANTHER OSJNBA0019K04.7 PROTEIN 16 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0456 Aed-Chr6 3970801 3978444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0456 4 573 Miscellaneous Gene Families AT5G51950 57.840 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0456 - - gmx:100796752 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0456 6 3970801 3978444 Aed6g0456 6 3970801 3978444 ECH