Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0434 ATGGCTAATTCTTCTTCTCCTTCCTCTCACTCTTATTTCACACACCTTCCTATTCATTCCTCTCACCAAGGTGAGAGCGAGGAGAAGCGCGTGGAGGACGATGAATCGCGTGTTCCGATTCACATCGTGACCGCGGCGTCGCAACTTCCGGTTGATTTTCTGGAACCCTCGCCTCAATCGAAGCTCGTCATCGGCTTTGATTGCGAGGGAGTTGACTTGTGTCGCAAAGGCACTCTCTGCGTAATGCAGCTTGCGTTTCCTGATGCAGTATACTTGGTTGATGCGATTGAAGGGGGAGAAGAGCTTATCATAGCGTGTAAGCCTGCACTTGAGTCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGACAGTGAGGCATTGTACTTTCAGTTTGGCATCAAGTTGAACAACGTAGTGGATACCCAGATTGCTTATTCACTTATAGAGGAGCAAGAAGGACGAAAGAGATCGCGAAATGACTACATTTCCTTTGTTGGCCTCCTTGCAGATCCACGCATATCATATGATGAGAAGGAAGAAGTTCGTGTCCTCCTTCGACAGGACCCCGAGTTTTGGACACACAGACCATTATCTGAACAAATGGTCCGTGCCGCTGCCGATGATGTTCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAATTAAATGAGCAGTCTTTATGGTATCTTGCAGTTCGTGGTGCCTTGTATTGCCGATGTTTTTGTGAGAACAGTGACAATTTTGCTGATTGGCCATCTCTAGCTCCGATTCCAGATAACCTGAATGCTGATGAAAATGAACCCGATGAAGAAATTCTTTCAGTTCTTGATATTCCCCAAGGAAAGATGGGACTTGTGATTGGGAAAAGAGGGGTGACCATTTTGTCAATTAAGCGGTCTTGCAATGCGGAAATTCTGACAGGAGGTCCCAAGGGTCCACCTGACAAGGTCTTCATCATCGGACCAGTGAAGGAGGTGAGGAAAGCCGAGGCCATGATACGGGGTAGAATCTTGGATATTTATTAG 1035 0.4599 MANSSSPSSHSYFTHLPIHSSHQGESEEKRVEDDESRVPIHIVTAASQLPVDFLEPSPQSKLVIGFDCEGVDLCRKGTLCVMQLAFPDAVYLVDAIEGGEELIIACKPALESNYITKVIHDCKRDSEALYFQFGIKLNNVVDTQIAYSLIEEQEGRKRSRNDYISFVGLLADPRISYDEKEEVRVLLRQDPEFWTHRPLSEQMVRAAADDVRFLLYIYHQMMEKLNEQSLWYLAVRGALYCRCFCENSDNFADWPSLAPIPDNLNADENEPDEEILSVLDIPQGKMGLVIGKRGVTILSIKRSCNAEILTGGPKGPPDKVFIIGPVKEVRKAEAMIRGRILDIY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0434 344 Gene3D K Homology domain, type 1 262 341 IPR036612 GO:0003723
Aed6g0434 344 MobiDBLite consensus disorder prediction 1 35 - -
Aed6g0434 344 MobiDBLite consensus disorder prediction 1 20 - -
Aed6g0434 344 MobiDBLite consensus disorder prediction 21 35 - -
Aed6g0434 344 Pfam 3'-5' exonuclease 57 225 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aed6g0434 344 PANTHER EGALITARIAN, ISOFORM B 12 341 - -
Aed6g0434 344 Gene3D - 2 246 IPR036397 GO:0003676
Aed6g0434 344 SMART kh_6 273 341 IPR004087 GO:0003676
Aed6g0434 344 PANTHER - 12 341 - -
Aed6g0434 344 Pfam KH domain 279 337 IPR004088 GO:0003723
Aed6g0434 344 SMART 35exoneu6 40 226 IPR002562 GO:0003676|GO:0006139|GO:0008408
Aed6g0434 344 CDD KH-I 279 336 - -
Aed6g0434 344 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 270 342 IPR036612 GO:0003723
Aed6g0434 344 CDD Egl_like_exo 52 245 - -
Aed6g0434 344 SUPERFAMILY Ribonuclease H-like 23 247 IPR012337 -
Aed6g0434 344 ProSiteProfiles Type-1 KH domain profile. 274 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0434 Aed-Chr6 3821286 3825709 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0434 K18740 - gmx:100788577 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0434 6 3821286 3825709 Aed6g0434 6 3821286 3825709 ECH