Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0397 ATGGGCATGGGCGAACTCTTCAAACTCGGCAAAGTCGAGTGGAATCCTTCGCCGGTCATCGCCTTAGCCACCAGCATCGACGGCTCCCGAATCGCCGCGGCTCGCCAAGATGGCTCTCTTGAAATATGGCTCGTCTCTCCCGGCTCCATCGGCTGGCACTGTCAGCTGACTTTACCTGGAAAACCTAACGGCGGAAGAGTGACGTCCCTTATTTGGTGCCCCGGTGGCTCCGACGACGGAGGCCGCTTGTTTTCGTCCCACATAGATGGCTCCATCACTAAGTGGGATCTTTCCCACTTGACGCAGGAGACGGTGCGGAAATCGGATGGTTTCACAATATGGCAAATGGCAGTGACTTTTCCTAAGGGCGGCGACAAGATCAATGGTAAAAGGAAGGGTGAACGAATGGGGAATGGGTTTCATAATGATTTTGATGAACATGAGAGCAGTGAAAGTGATGACGATTCTTATTCGCCTGGTCCTCTTGAGCGTTCTGTCTGTGAGCATCCACGCGTCGCCATTGCTCTAGACAATGGATATGTGAGAATCTATGATATCTCTGACACAGATGAATTTATTCATGTAAAATCTTTGCCCCCGGTCAAAGGACGAGTTTTAAGTGTGACTTGGAGTACAGATGCTAACTACATATATTCGGGAAGTAGTGATGGGTTGATACGATGCTGGAATGCCACATTGGGAAATGAAATCTATAGGATTACAGCGGGGCTTGGAGGGTTGGGAAATGTACATGAACTTTGCATATGGTCATTACTGTCTTTAAGGTCTGGTACACTTGTTAGTGCGGACAGCAGTGGTAGTGTCCAGTTTTGGGACAGCCAACATGGAACTCTCTTGCAAGCACATTCTTTACACAAAGGGCATGTACATGCTCTGGCAGCAGCTCCTAGTCATGATAGGGTGTTCTCTGCTGGTTCTGATGGCAAGGTTATTCTGTACAAGCTATCTAGTAGTCAGTCAGCATCATCCAATGATATCAGTTCTCCATCAACAATGAAGAGATGGATCTATGTTCACCATGTAAGGGCTCATACACATGACATCAGGGCCCTGACTGTTGCTGTACCGATATGTCATGAAGCTGATATTAAGCCAGAAAAGAGGAATAAGAGAGCTCGGCGTGCAGGAAAGCACAATGGTTTCCGTTACCATAAGTGGGCTCATTTGGGGGTTCCCATGCTTATCTCAGCAGGAGATGACACAAAGCTTTTTGCATACCCGGTGAAAGAATTTACCATGTTTTCTCCTCATGATATCTGTCCTGCACCTCAGAGAACACCCATTCAACTAGTGCATAATTCTGTCTTTAATCAATCCAAAATGCTTTTAGTCCAATTTCCCCAAAAGATAGATGTTCATTTGCTACACCTAAAAAATGCACGCACCTCTGGAGGCTTTATAAAACCCGATATAGTGGCTCGAGTGAATAGTAAGGCATCTCGGAAGATAATTTGCAGCAGCATTTCTAATTCAGCAGCGCTATTTGCATACTCTGATGATAAAAATCCTAGTCTTTTTGAATTGAAAAGGGATGAAGAAGTTGGAAAAATCACATGGAATGTTAGTAAAAGGGATCTTCCTCGGATATTACCATTTGCCCATTCTATGATTTTTACTCATGACTCCTCCAAGTTGATAGTAGCAGGTTGCGATAAAAGGATATATGTTGTGGATGTAGATAGGGCAGAATTAGTGCATACTTTTACACCCCGTCGCGATTCGCTAGATGAGGAATTACCACCAACTGAGCCACCCATAACAAGATTGTTTACTAGTTCTGATGGGCAGTGGTTGGCTGCTGTGAACTGCTTTGGGGATATATATGTATTTAACATGGAGATACAAAGCCAGCACTGGTTCATTTCAAGATTAGATGGCGCCTCTGTAACAGCTGGTGGATTTCCCCCCCAGAATGACAATATACTGATAGTTACAACTTCCTCAAATCAAGTGTATGCATTTGACTTAGAAGCCAAGCAGTTGGGAGAATGGTCCAAACGGCACACACATGCTCTTCCTAGGAGATACCAGGAATTTCCTGGTGAAGTTATTGGGCTTTCATTCCCTCCATCAGAAACTTTATCTTCTCCATCGACAACTTCATCTTCAGTTGTTGTTTACAGTTCCAGGGCAATGTGCGTGATTGACTTTGGGTTGCCCGTGGAACAAGATGAAAGTGACATGCTAAATACTCAAGATTCGTGGGCAAGGAATTTACAAAATTTTAATGTTAAGAAGATGACTAAACATAATAAGAGCAACTTTGAAGTTTTACCTTTAAAGAATCCTGTTTTATTTTTATCTCATACTTCAAAAAGTTCCATGTTTATGGTAGACAAACCCTGGTTGCAAGTGGTCAAGAGTTTAGAAGCCCAACCAGTCCACAGACATATATATGGGACATGA 2427 0.4392 MGMGELFKLGKVEWNPSPVIALATSIDGSRIAAARQDGSLEIWLVSPGSIGWHCQLTLPGKPNGGRVTSLIWCPGGSDDGGRLFSSHIDGSITKWDLSHLTQETVRKSDGFTIWQMAVTFPKGGDKINGKRKGERMGNGFHNDFDEHESSESDDDSYSPGPLERSVCEHPRVAIALDNGYVRIYDISDTDEFIHVKSLPPVKGRVLSVTWSTDANYIYSGSSDGLIRCWNATLGNEIYRITAGLGGLGNVHELCIWSLLSLRSGTLVSADSSGSVQFWDSQHGTLLQAHSLHKGHVHALAAAPSHDRVFSAGSDGKVILYKLSSSQSASSNDISSPSTMKRWIYVHHVRAHTHDIRALTVAVPICHEADIKPEKRNKRARRAGKHNGFRYHKWAHLGVPMLISAGDDTKLFAYPVKEFTMFSPHDICPAPQRTPIQLVHNSVFNQSKMLLVQFPQKIDVHLLHLKNARTSGGFIKPDIVARVNSKASRKIICSSISNSAALFAYSDDKNPSLFELKRDEEVGKITWNVSKRDLPRILPFAHSMIFTHDSSKLIVAGCDKRIYVVDVDRAELVHTFTPRRDSLDEELPPTEPPITRLFTSSDGQWLAAVNCFGDIYVFNMEIQSQHWFISRLDGASVTAGGFPPQNDNILIVTTSSNQVYAFDLEAKQLGEWSKRHTHALPRRYQEFPGEVIGLSFPPSETLSSPSTTSSSVVVYSSRAMCVIDFGLPVEQDESDMLNTQDSWARNLQNFNVKKMTKHNKSNFEVLPLKNPVLFLSHTSKSSMFMVDKPWLQVVKSLEAQPVHRHIYGT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0397 808 SUPERFAMILY WD40 repeat-like 17 321 IPR036322 GO:0005515
Aed6g0397 808 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 198 230 - -
Aed6g0397 808 MobiDBLite consensus disorder prediction 125 163 - -
Aed6g0397 808 Gene3D - 6 133 IPR015943 GO:0005515
Aed6g0397 808 Gene3D - 154 425 IPR015943 GO:0005515
Aed6g0397 808 PANTHER WD REPEAT-CONTAINING PROTEIN PCN 3 808 IPR044622 GO:0010073|GO:0035266
Aed6g0397 808 Gene3D - 468 719 IPR015943 GO:0005515
Aed6g0397 808 ProSiteProfiles Trp-Asp (WD) repeats profile. 289 330 IPR001680 GO:0005515
Aed6g0397 808 MobiDBLite consensus disorder prediction 125 158 - -
Aed6g0397 808 SUPERFAMILY WD40 repeat-like 265 698 IPR036322 GO:0005515
Aed6g0397 808 Pfam WD domain, G-beta repeat 205 230 IPR001680 GO:0005515
Aed6g0397 808 ProSiteProfiles Trp-Asp (WD) repeats profile. 198 239 IPR001680 GO:0005515
Aed6g0397 808 SMART WD40_4 282 321 IPR001680 GO:0005515
Aed6g0397 808 SMART WD40_4 5 44 IPR001680 GO:0005515
Aed6g0397 808 SMART WD40_4 241 279 IPR001680 GO:0005515
Aed6g0397 808 SMART WD40_4 191 230 IPR001680 GO:0005515
Aed6g0397 808 SMART WD40_4 530 565 IPR001680 GO:0005515
Aed6g0397 808 SMART WD40_4 51 96 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0397 Aed-Chr6 3427562 3434334 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0397 K14548 - gmx:100797494 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0397 6 3427562 3434334 Aed6g0397 6 3427562 3434334 ECH